Serratia quinivorans: E4343_15340
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Entry
E4343_15340 CDS
T05941
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
squ
Serratia quinivorans
Pathway
squ03420
Nucleotide excision repair
squ03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E4343_15340 (uvrD)
03430 Mismatch repair
E4343_15340 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_15340 (uvrD)
Enzymes [BR:
squ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4343_15340 (uvrD)
DNA repair and recombination proteins [BR:
squ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4343_15340 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
E4343_15340 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
QBX67460
LinkDB
All DBs
Position
complement(3259836..3261998)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRGNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQF
RLLKRIVKALNIDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNSIQYAWIRLLAGNN
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAQSVLLEQNYRSTSNILKSANTLIANN
GGRMGKNLWTEGGEGEPISVYCAFNELDESRFVVGRIKAWQENGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDEVRRTARDRQLTLWQATRALLQDKVLAGRAASALQRFTELVDSLAHETADMPLHIQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGLTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPANHRRMG
TPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttccgatctgctcgacagcctgaatgaaaaacaacgcgaagccgtggcggcg
ccacgtggcaacctgttggtactggccggcgcgggcagcggtaaaacccgggtgctggtg
catcgcatcgcctggctgctggcggtagagaactgctcgccgtattccatcatggcggtg
accttcaccaacaaggcggcggcggaaatgcgccaccgtatcgaacacctgattggcacc
agccagggcggcatgtggattggtaccttccacggtctggctcatcggctgctgcgcgct
catcatttggatgccaacctgccgcaggatttccaaatcctcgacagtgacgaccagttc
cgcctgctcaagcgtatcgtcaaagcgttgaatatcgacgagaagcaatggccgccgcgt
caggcaatgtggtacatcaacggcaaaaaagatgagggcctgcgcccgcagcacgttgaa
acctacaacaacccggtggaagcgacctggctgcgtatctaccaggcctaccaggaagcc
tgcgatcgcgccgggctggtggactttgccgagctgttgctgcgtgcccatgagctgtgg
ctgaacaagccgcatatcctcaatcattaccgcgaacgcttcaccaacgtgctggtggac
gagtttcaggataccaacagcattcagtacgcctggatccgcctgctggccggcaataac
agcaacgtgatgatcgtcggcgacgatgaccagtcgatctacggctggcgcggcgctcag
gtggaaaatatccaacgcttcctgaaggatttccccggtgcgcaaagcgtacttctggaa
cagaactaccgttcgaccagcaatatcctgaaatcggccaacaccctaatcgccaacaac
ggcggacgcatggggaaaaatctgtggaccgagggcggcgaaggcgagcctatctcagtc
tactgtgccttcaacgagctggatgaatcgcgcttcgtagtgggccgtatcaaagcctgg
caggaaaacggcggtgcgctgaatgattgcgccatcctttatcgcagcaatgcccagtcg
cgcgtactggaagaggcgctgctgcaaacggcgatgccataccgtatttacggcgggcag
cgcttcttcgagcgtcaggagatcaaggatgccctggcctacctgcggctgatcgctaac
cgcaacgacgatgctgcgttcgaacgcgtggtgaatacgccgacgcgtggcattggtgac
cggacgctggacgaagtgcgtcgtacggcccgcgatcgtcaattgaccctgtggcaggcc
acccgcgcactgttgcaggacaaggtgctggccgggcgcgcggcatcagcactgcaacgc
tttaccgagctggtggactcactggcgcacgaaaccgccgatatgccactgcacattcag
accgatcgggtgatccgcgattcggggctgttcattatgtatgagcaggagaagggcgaa
aaaggtcaggcacgtatcgaaaaccttgaggaactggtgacggcaacgcgccagtacagc
tatcaggatgaagatcaggatctgatgccgctgcaggcgtttctgtcacatgctgcgctg
gaagcgggcgaggggcaggccgatgcctatcaggacgcggtgcagttgatgaccctgcac
tcggccaaggggctggagttcccgcaggtgtttatcgtcggcatggaagaggggatgttc
ccgagccaaatgtcgctggacgaaggcggcaggctggaagaagagcgccgcctggcctac
gttgggttgacgcgcgccatgcagaaactgacgctgacctatgccgaaacccgtcgtctg
tacggcaaagaggtttatcaccggccttcacgtttcatcggcgaactgccggaggagtgt
gtggaagaagtgcgtttgcgcgccagcgtctcacggccggcgaatcaccgccgcatgggc
acgccgatcagcgaaaacgacaccggttacaagctgggccagcgagtgcgccaccccaag
tttggcgaagggactatcgtcaatctggaaggcagcggcgaacacagccggttgcagatt
gctttcccgggtgaaggcatcaagtggctggtggccgcttacgcccgcctggagacggtg
taa
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