Serratia quinivorans: E4343_20140
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Entry
E4343_20140 CDS
T05941
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
squ
Serratia quinivorans
Pathway
squ00330
Arginine and proline metabolism
squ00480
Glutathione metabolism
squ01100
Metabolic pathways
squ01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
E4343_20140 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
E4343_20140 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
E4343_20140 (speF)
Enzymes [BR:
squ01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
E4343_20140 (speF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QBX68333
LinkDB
All DBs
Position
4295211..4297373
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AA seq
720 aa
AA seq
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MKELKIATSASLVATIETLRQVVRIEQTDYTDVAALVVSVDDVNAGHLAQLKATGFEIPT
FVAVAGDEHLSPDYLPLISGVFALEGASKAFYMAQLEAAADAYEQALLPPFFKTLKTYVE
MENSTFACPGHQGGEFFRKHPAGRKFFEFYGETLFRSDMCNADVKLGDLLIHEGSAKDAQ
KHAARVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDSRCFDERYLREQIREVAPEKANAARPFRLAIIQLGTYDGTIYNA
RQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDELDPGIFVTQSVHKQQAGF
SQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGAAGRRM
WLDCVKLGIETRKQLLERCSQLRPFIPPQVAGKNWQDYDTDLIANDARFFNFVPDEKWHG
FEGYAQDQYLVDPCKLLLTTPGIDAATGQYTEFGVPATILANFLRENGIVPEKCDLNSIL
FLLTPAENPAKMEQLVDMLVQFERYVEEDAPLSVVLPTVYRKNEQRYRGYTLRQLCQEMH
DLYVSFDVKQLQKEMFRQRHFPQVMMNPQDANVEFIRDNVELVPIGQAEGRIAAEGALPY
PPGVLCVVPGEVWGGAVQRYFLALEEGINRLPGFSPELQGVYIEKKDHGWKRIFGYMIKQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaaatagccaccagcgccagtttggttgccaccattgaaacactgcgc
caggtcgtccgcatcgagcaaacggactacaccgacgtggccgcgttagtggtgtcggtt
gatgacgtcaacgcaggtcatctggcgcagctcaaagcgaccgggttcgagatcccgacc
tttgtggcggtggcaggggacgagcatctctccccggactacctgccgttgatcagcggt
gtttttgcgctggaaggcgccagcaaggcgttctatatggcacagctcgaagccgccgcc
gatgcctacgagcaggcgctgctgccgccgtttttcaagacgctgaaaacctatgtggaa
atggaaaactcaacctttgcctgcccgggccatcagggcggcgagtttttccgcaagcat
ccggccggccggaagttttttgagttctacggtgaaacgctttttcgttccgacatgtgc
aacgccgacgttaagctgggcgatttattgatccacgaaggctcggccaaggatgcgcaa
aagcatgcggcacgggtattcaacgccgataaaacctatttcgtgcttaatggtacctct
gccgccaataaggtcgtgaccaatgctttgctgacccgcggtgatttggtgttgttcgat
cgcaacaaccacaagtccaaccaccacggtgcactgatccaggccggggcaacgccggtc
tatctggaaaccgcgcgtaacccgtttggtttcatcggcggcattgattcgcgctgcttt
gatgagcgttacctgcgcgagcaaatccgcgaagtggcgcctgaaaaggccaatgcggca
cgtccgttccgcctggcgattattcagctcggtacctacgacggcaccatctataacgcc
cgtcaggtgatcgacaccatcggccacctgtgtgactacattctgtttgactctgcctgg
gtggggtacgaaggctttatcccgatgctgaaagagtgctcgccgctgttgctggagctg
gatgagctggatccgggcatctttgttacccagtcggtgcataaacaacaggccggtttc
tcgcagacttcgcaaatccacaagaaagacgaccacatcaagggccagaagcgccactgc
aaccacaagcaccttaacaatgctttcatgctgcacgcctctaccagcccgttctaccca
ctgtttgccgcgctggacgttaacgccaagatgcatgccggggctgccggtcgtcgcatg
tggctggactgcgtgaaactgggtatcgagacgcgcaagcaactgctggaacgctgctcg
cagctcaggccgtttattccgccgcaggtggcgggtaaaaattggcaggattacgacacc
gatctgatcgccaacgacgcgcgtttcttcaattttgtgccggatgaaaaatggcacggt
tttgaaggttacgcgcaggatcagtacctggtcgacccgtgcaagctgctgctgacgacg
ccgggtatcgacgcggctaccggccagtacaccgagtttggcgtaccggcgactattctg
gccaacttcctgcgtgagaacggcatagtgccggagaaatgcgatcttaactcgatcctg
ttcctgctgaccccggcggaaaatccggccaagatggagcagttggtggatatgctggtg
cagttcgaacgctatgtggaagaagacgcgccgctgagcgtggtgctgccaacggtgtat
cgcaagaatgaacagcgctatcgcggctatacccttcgccaattgtgccaggaaatgcat
gacctgtacgtcagctttgatgtcaaacagttgcagaaagaaatgttccgccagcgccat
ttcccgcaggtgatgatgaacccacaggatgccaacgtggagtttatccgcgacaacgtt
gaactggtgccgattggccaggcggaagggcgcattgcggcggagggcgcgctgccttac
ccaccgggcgtgttgtgcgtggtgccgggggaagtatggggcggggcggtgcagcgttac
ttcctggcgctggaagagggtatcaaccggctgccgggcttctcaccggagctgcagggc
gtgtatatcgagaaaaaggatcacggctggaaacgtatcttcggttatatgatcaagcaa
tag
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