Serratia quinivorans: E4343_21345
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Entry
E4343_21345 CDS
T05941
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
squ
Serratia quinivorans
Pathway
squ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E4343_21345 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_21345 (recB)
Enzymes [BR:
squ01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E4343_21345 (recB)
DNA repair and recombination proteins [BR:
squ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E4343_21345 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QBX68558
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All DBs
Position
4555198..4558749
Genome browser
AA seq
1183 aa
AA seq
DB search
MTETTPQRLDPLTLPLFGERLIEASAGTGKTFTIGALYLRLLLGLGQAAAFPRPLTVEEI
LVVTFTEAATEELRGRIRSNIHGLRIACVRGSSKDPLFNALMAEIDDLPDAAAQLLAAER
QMDEAAIYTIHGFCQRMLTHNAFESGILFEQTLVQDELPLRRQACADFWRRHCYPLPIGV
ARAVSQEWSGPEALLADLSGYLHGEAPMLRRPPKDEETVLMRHEQIVARIDALKAQWLAA
AGDLEALISQSGVDKRSYSSKHLPNWLQKVGEWVVLETQDYQLPKELDKFRQSVLLEKTK
KGEPPHHALFVAIDELFDEPLTLRDLIMARALSEIRLSIQQEKRQRAELGFDDLLSRLDS
ALQSEGGERLAQAIRQRYPVAMIDEFQDTDPQQYRIFQKLYVSRPECGLLLIGDPKQAIY
AFRGADIFTYMRARSEVSAHYTLETNWRSSPAMVNSVNHLFAQVEKPFLFGQIPFIEVAA
AEKNRGLAFELQNQPQPAMQFWLQQGEGVGVSEYQQLMARLCATQIRDWLSAGQNQQAWL
VDGEKRRAVEASDITVLVRSRNEAALVRDALSALAIPSVYLSNRDSVFDTPEAKDLLWLL
QAVLAPEQERTLRSAMATGLMGLDAQALDGLNRDERAWDALVNEFDKYRTLWLRRGVLPM
LREVMNQRHLAENLLASLGGERRLTDVMHLGELLQEASAQLDSEHALVRWLAQQIAQPNR
QSDNQQLRLESDRHLVQVITIHKSKGLEFDLVWLPFVGNFRQQQQVLYHDRHSFQALLDL
NADEQSIEWAEEERLAEDLRLLYVALTRSVYHCSIGIAPLIQGTRKKQGDSDLHRSALGY
LVQASQAGDAAYLQQCLQQLAVDGVALSLVESLDEQPWQPQTPDLTELSAKHFTRQVQDF
WRVTSYTGLQQHGTSLMQDLLPRLDVDAAGEQAQDSEPALTPHTFPRGAGPGTFLHSLFE
TIDFTQPLDEAWLLEQLQQQGFGEHWQPILLAWMQVLLNTPLNDTGVALSALAPQHKQAE
LQFYLPIEQLLQARELDKLVKSYDPLSARCPELDFQQVQGMLKGFIDLVFCWQGKYYLLD
YKSNWLGEDSSAYTQPAMEQAMAEHRYDLQYQLYTLALHRYLRHRLPDYDYQRHFGGVIY
LFLRGVDALHPGNGIFACRPQEQLVEGMDLLFSGKTAAVEDAS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaccaccccgcagcgacttgatccgctaacgttgccgctatttggcgagcgg
ttgatagaagcgtcggcggggaccggtaaaacctttaccatcggtgcgctgtatctgcgc
ctgctgcttggcctgggccaggcagcggcctttccccggccgctgacggtagaggagatc
ctggtggtgacctttaccgaggccgccaccgaggagctgcgtggacgcatccgcagcaat
atccatggcttacgcattgcctgcgtacgtggcagcagtaaagacccgttatttaatgcg
ttaatggcggaaattgacgatctgcccgatgctgccgcgcaactgctggctgccgagcgg
cagatggacgaagcggcaatctacaccatccacggtttttgccagcgtatgctgacccac
aacgccttcgagtccggcattctgtttgagcaaacgctggtgcaggatgaactgccgctg
cgccgccaggcctgtgcggacttttggcgtcgccattgttatccgttgccgattggcgtt
gcccgggcggtgagtcaggaatggagcggcccggaagcgctgctggccgatctttccggc
tatctgcatggcgaagcgcccatgctgcgtcggccgccgaaggatgaagaaacggtgctg
atgcgccatgagcagatcgtggcgcgtattgacgccctcaaagcgcagtggctggcagcg
gcgggcgatttggaggcgttaatcagccagtccggcgttgataagcgcagttacagcagc
aaacacctgcctaactggctgcagaaggtgggtgaatgggtggtgctggaaactcaggac
taccaactgccgaaagagctggataaatttcgccagtcggtactgttggagaaaaccaaa
aaaggcgaaccgccgcaccatgcattgttcgtggcgatcgacgaactgttcgatgaaccg
ctgacactgcgtgatttgatcatggcgcgggcgctgagcgagatacgtttgtccattcag
caggagaaacgccagcgggccgagctgggttttgacgacctgttaagtcggctggacagt
gcattgcagagcgaaggtggtgaacgtttggcacaggcgattcgccagcgttacccggtg
gcgatgatcgatgagttccaggataccgatccacagcaataccgcatcttccaaaaactc
tatgtcagcaggccggaatgcggcctgctgctgatcggcgatcccaaacaggcaatttac
gctttccgcggtgccgatatctttacctatatgcgcgctcgttcagaggtaagcgcccac
tacacgctcgaaaccaactggcgctcctcaccggcgatggtgaacagcgttaaccatctg
tttgcgcaggtggaaaaacctttcctgttcggccagattccctttattgaggtggccgcc
gccgagaaaaatcgggggctggcgtttgagctgcaaaatcagccgcagccggcgatgcag
ttctggctgcagcagggggaaggtgttggcgttagtgagtaccaacaattgatggcgcgc
ctgtgcgccacgcaaattcgcgactggctcagcgccggacaaaaccaacaggcctggctg
gtcgatggcgaaaaacggcgggcggtagaggcgtcagacattaccgtgctggtgcgcagc
cgcaatgaggcggcgttagtacgtgatgccctgagtgcgctggcgataccttcggtttat
ttgtccaaccgcgacagcgtattcgatacgccagaagccaaggatttgctgtggctgctg
caggccgtgctggcgccggagcaggaacgtacgctgcgcagtgccatggctaccgggctg
atggggctggatgcgcaggcgctggacggattgaatcgggatgagcgtgcctgggatgcg
ctggtcaacgagttcgataaatatcgtacgctgtggctgcgccgcggcgtgttgccgatg
ctgcgtgaggtgatgaatcagcgccatctggcagaaaacctgttggccagcctcggcggt
gagcgccggttgaccgacgtgatgcatctgggcgagcttttgcaggaagcttctgcacag
ctcgacagcgaacatgcgctggtgcgttggctggcgcagcagattgcccagcccaaccgg
cagtcagacaaccagcagctacggctggaaagcgaccgccatttggtacaggtgatcacc
atccataaatccaaagggttggagttcgatctggtatggctgccgttcgtcggcaatttc
cgccagcaacagcaggtgttgtaccacgatcgtcacagtttccaggctctgcttgacctc
aacgccgatgagcaaagtattgagtgggcagaggaggagcggctggcggaagatttacgc
ctgttgtatgtcgcgctgacccgttcggtataccactgcagtatcggcattgcgccgttg
attcagggcacccgcaaaaaacagggtgatagcgatttacaccgcagcgcgctgggctat
ctggtgcaggccagccaggccggcgatgcggcttatctgcagcaatgtctgcaacagttg
gctgtagatggcgttgcgctgtcgctggtcgaaagcctggacgagcaaccctggcagccg
caaacgccagacttgaccgaactgtcggcgaaacacttcacgcgccaggtgcaggatttc
tggcgggtgaccagctataccggtctgcaacagcacggcacgagcctgatgcaggatttg
ttgccgcggttggatgttgatgccgccggcgagcaagcgcaggacagtgagccagcgctc
acaccgcatacctttcctcgtggcgccggtccggggactttcctgcacagtctgtttgaa
acgatcgactttacccaacccctcgatgaggcgtggttgctggagcagttgcaacaacaa
ggatttggcgaacactggcaaccgatactgttggcgtggatgcaggtgctgttaaacacc
ccgcttaatgataccggcgtcgctttgtcggcgctggctccgcagcataagcaggctgag
ttgcagttttatctgcctatcgagcagctgttgcaggcgcgtgagctggataagctggtg
aaaagttacgatccgctttctgcccgttgccctgagttggattttcagcaggtgcagggg
atgctgaaaggatttatcgacctggtgttctgctggcaggggaaatattacctgctggac
tacaaatccaactggttgggtgaagacagcagtgcctatacccaaccggcgatggagcag
gcgatggcggaacatcgttacgatttgcagtaccagctatacacgctggcactgcaccgc
tatctgcgccataggttgccggattatgattatcagcggcacttcggcggggtgatttat
ctgttcctgcgcggtgtggatgcactgcatccgggcaatggcatttttgcctgccgtccg
caggagcaattggtggaaggcatggatttgttattcagcggtaaaaccgctgcggtggag
gatgcatcatga
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