KEGG   Serratia quinivorans: E4343_21835
Entry
E4343_21835       CDS       T05941                                 
Symbol
nrdF
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta
  KO
K00526  ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Organism
squ  Serratia quinivorans
Pathway
squ00230  Purine metabolism
squ00240  Pyrimidine metabolism
squ01100  Metabolic pathways
squ01232  Nucleotide metabolism
Module
squ_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
squ_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:squ00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    E4343_21835 (nrdF)
   00240 Pyrimidine metabolism
    E4343_21835 (nrdF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:squ03400]
    E4343_21835 (nrdF)
Enzymes [BR:squ01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     E4343_21835 (nrdF)
DNA repair and recombination proteins [BR:squ03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    E4343_21835 (nrdF)
SSDB
Motif
Pfam: Ribonuc_red_sm
Other DBs
NCBI-ProteinID: QBX68643
LinkDB
Position
complement(4660479..4661450)
AA seq 323 aa
MNSIKPAQLVRAVNWNIIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSWATLTPKEQQLT
IRVFTGLTLLDTIQNTVGAPALIADAITPHEEAVYSNISFMEAVHARSYSSIFSTLCQTP
DVDDAYRWSEENRALQKKASIILAHYRSDDPLMKKVASVFLESFLFYSGFYLPMYWSSRA
KLTNTADLIRLIIRDEAVHGYYIGYKFQKGLERVDAARRQQVKNFAFDLLQDLYDNEVRY
TEELYDGVGWSEDVKTFLHYNANKALMNLGYEALFPPSMAEVNPAILSALSPNADENHDF
FSGSGSSYVIGKAVNTEDDDWDF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgaatagcattaaaccggcgcagctggtgcgcgcagtcaactggaacatcatcgaagac
gacaaggatctggaggtgtggaaccgtctgacctccaacttctggctgccggagaaggtg
ccgctgtcgaacgatattccctcgtgggccacgctgacgccgaaggaacagcaactgacc
atccgggtgttcaccggcctgacgctgctcgataccattcagaataccgtcggagcaccc
gcgctgatcgccgatgccattacgccgcacgaggaggctgtgtactccaatatcagcttt
atggaggcggtacacgcccgctcctacagctcgattttctccacgctgtgccaaacgccg
gacgttgacgacgcctaccgctggagcgaggaaaaccgtgcgctgcagaaaaaggccagc
atcattttggcccactaccgcagtgacgatccgctgatgaagaaggtcgccagcgtgttc
ctcgagtcgttcctgttctattcgggcttttacctgccgatgtactggtcgagccgcgcc
aaactgaccaacaccgccgatctgatccgcctgatcatccgcgacgaggcagtacacggc
tattacattggctataaattccagaaagggttggagagggtcgatgccgcccgccggcaa
caggtgaaaaactttgccttcgatctgctgcaggatctgtacgacaacgaggtgcgttac
accgaagagctgtacgacggcgtgggctggagcgaggacgtgaaaaccttcctgcactat
aacgccaacaaggcgctgatgaatctggggtacgaagcgctatttccgccgtcgatggcg
gaggtcaatccggcgattctgtcagcgctgtcgccgaacgccgatgagaaccacgacttc
ttctccggctccggctcgtcttacgtgattggtaaagcggtcaataccgaggatgacgac
tgggatttttga

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