KEGG   Serratia quinivorans: E4343_21840
Entry
E4343_21840       CDS       T05941                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
squ  Serratia quinivorans
Pathway
squ00230  Purine metabolism
squ00240  Pyrimidine metabolism
squ01100  Metabolic pathways
squ01232  Nucleotide metabolism
Module
squ_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
squ_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:squ00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    E4343_21840 (nrdE)
   00240 Pyrimidine metabolism
    E4343_21840 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:squ03400]
    E4343_21840 (nrdE)
Enzymes [BR:squ01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     E4343_21840 (nrdE)
DNA repair and recombination proteins [BR:squ03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    E4343_21840 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: QBX68644
LinkDB
Position
complement(4661459..4663603)
AA seq 714 aa
MATTELTRPTTSALDYHSLNAMLNLYDAEGRIQFDKDRLAARHYFLQHVNQNTVFFHNLE
EKLRYLVEEGYYEQSVLAQYDFAFIKQLFQQAYAKKFRFETFLGAFKYYTSYTLKTFDGK
RYLERYEDRVCMVAMTLAAGDTALAQDLVEEMISGRFQPATPTFLNCGKQQRGELVSCFL
LRIEDNMESIGRAVNSALQLSKRGGGVAFLLTNIREVGAPIKRIENQSSGVIPIMKMLED
AFSYANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFELA
KNNEEMYLFSPYDVEQVYGVPFSEISVSEKYREMVDDKRIRKSRINAREFFQVLAEIQFE
SGYPYMMFEDTVNRENPIAGRINMSNLCSEILQVNRASTYHDDLSYDQVGKDISCNLGSL
NIAKTMDAPDFGKAVDTAIRALTAVADMSDIRSVPSIAEGNRSSHAIGLGQMNLHGYLAR
ERIFYGSEEGIDFTNIYFYAVAYHAIRTSNQLAIERGSAFGGFEDSTYASGEYFSKYTER
DWLPQTERVRTLFADANIAIPGREEWLALRQSVMMHGLYNQNLQAVPPTGSISYINNSTS
SIHPIVSRIEIRKEGKIGRVYYPAPYMTNENLEYYQDAYDIGPEKIIDTYAAASQHVDQG
LSLTLFFRDTATTRDINRAQIYAWRKGIKTIYYIRLRQMALEGTEVQGCVSCAL
NT seq 2145 nt   +upstreamnt  +downstreamnt
ttggcaacgacagaactgaccaggcccaccaccagcgcgctggattatcattcgctcaac
gcgatgctcaatctttatgatgccgaaggccgcatccagtttgataaggatcgactggcg
gcgcggcactacttcctgcagcacgtgaatcaaaacaccgtgttcttccacaacctggaa
gaaaagctgcgttatctggtggaagaaggctattacgagcaaagcgtactggcgcaatac
gacttcgcctttatcaagcagttgttccagcaggcctacgcgaaaaaattccgcttcgag
acctttctcggcgcctttaagtactacaccagctacacgctgaaaacctttgacggcaaa
cgctatctggaacgctacgaggaccgggtgtgcatggtcgccatgacgctggccgcaggc
gataccgcactggcgcaggatttggtagaagaaatgatctccggtcgcttccagccggcg
acgccgaccttcctcaactgcggcaaacagcagcgcggcgaactggtttcctgcttcctg
ctgcgcattgaagacaacatggagtcgattggccgggcggtgaactccgcgctgcaactg
tcgaaacgcggcggcggcgtggcatttttgctgaccaatatccgtgaagtcggtgcgccg
atcaaacgcattgagaaccaatcctccggcgttattccgatcatgaaaatgctggaagac
gccttctcttacgccaaccaactgggcgcacgccagggggcaggagcggtctatctcaat
gcccaccacccggatatcctgcgtttcctcgacaccaaacgcgaaaacgccgacgagaag
atccgcattaaaacgctgtcgctgggggtggtgatcccggatatcaccttcgagctggcg
aaaaacaacgaagagatgtacctgttctcgccgtatgacgtcgagcaggtgtatggcgtg
cccttctcggaaatcagcgtcagcgagaaatatcgcgaaatggtggatgacaagcgcatc
cgcaaatcacgcatcaatgcgcgcgagtttttccaggtgctggcggagatccagttcgaa
tctggttacccgtacatgatgtttgaagataccgtcaatcgtgagaacccgatcgccgga
cgcatcaatatgagtaacctgtgctcggagattttgcaggttaaccgcgccagcacttac
cacgatgacctgagctatgaccaggtgggcaaggatatctcctgcaacctcggctcgcta
aacatcgccaaaaccatggatgcgccggacttcggcaaagccgtcgacaccgcgatccgt
gcgctgacggctgtagcagatatgagcgacatccgctcggtgccgtcgatcgccgaaggc
aatcgcagctcgcacgccatcggtctgggccagatgaacctgcacggctatctggcacgc
gaacgcatcttttatggctcggaggaagggattgatttcaccaacatctatttctacgcc
gttgcttaccacgccattcgcacctctaaccaattggcgattgaacgcggcagcgccttc
ggcggctttgaggattccacctacgcctccggtgagtatttcagcaaatacaccgagcgg
gattggctgccacagaccgagcgagttcgcacactgttcgccgacgccaatatcgccatt
ccaggccgtgaagagtggctggcactgcgccagtcggtgatgatgcacgggctgtacaac
cagaacctgcaggcggtgccaccaaccggttccatttcttacatcaataattcgacctcc
agcattcatccgatcgtgtcacgcatcgagatccgtaaagagggcaagattggtcgcgtg
tattatccggcgccctatatgaccaacgaaaacctggagtactaccaggatgcctatgac
atcgggccggaaaagatcattgatacctatgccgccgccagccagcacgtcgatcaggga
ttgtcgctgacgttgttcttccgcgacaccgccactacgcgcgacatcaaccgcgcgcag
atttacgcctggcgtaaaggcatcaaaaccatttattacatccgcctgcgccagatggcg
ttggaaggcaccgaggtgcagggctgcgtgtcctgcgcactgtga

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