Serratia quinivorans: E4343_24525
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Entry
E4343_24525 CDS
T05941
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_24525
DNA repair and recombination proteins [BR:
squ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
E4343_24525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
Zn_Ribbon_1
AAA_16
zf-tcix
Zn_ribbon_3
AAA_22
SLFN-g3_helicase
AAA
Motif
Other DBs
NCBI-ProteinID:
QBX69132
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Position
complement(5220840..5222597)
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AA seq
585 aa
AA seq
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MAFTLRPYQLEAVEATIKHFRQHPQPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYRAYGLEADIFAAGLQQKDSAGKVVFGSVQSVARNLPLFDGAFSLLIIDECH
RISDDDDSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDANSLFRD
CIYELPLRYMIKNGFLVPPERLDMPIVQYDFSRLEARSNGLFSEVDLNRELKQQNRITPH
IISQIVEYAETRKGVMIFASTVEHAREIHGLLPPGEAALVSAETPAAERDALIEAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHGDSQPVQVFCPGCGFANLFWGKCTENGDIIEHYGRRCQGWLEDDEG
HREQCDYRFRFKICPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGME
LQSGRDEKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFAWQTA
ADVLAQQAALRHPDFVVARKRGQFWQIREKVFDYQGRFRRANELS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactctacgcccctaccaactggaagcggtcgaagccaccatcaaacatttc
cgtcagcatccacaaccggcgctgatcgtgctgccgaccggggccggtaaaagcctggtg
atcgccgagttggcgaagcgcgcgcgtggccgggtattggtgctggctcatgtgaaagaa
ctggtggcgcaaaaccacgccaaataccgcgcctacgggttggaagccgatatctttgcc
gccgggctgcagcaaaaagacagcgccggcaaggtggtattcggcagcgtacaatccgtg
gcgcgtaacctgccattgtttgacggtgcgttttcgctgttgattatcgacgaatgccac
cgcatcagtgacgatgacgacagccagtaccagcagattattcagcatctgcaaaaaacc
aatccgcagttgcggctgctgggcctgaccgccacgccctaccggctgggcaaaggctgg
atttatcagtatcactatcacggttttacccgtggcgatgccaacagtctgtttcgtgac
tgcatctatgaactgccgctgcgctacatgatcaaaaacggcttcctggtgccgccggaa
aggctggacatgcctattgtgcagtatgatttcagccgtctggaggccagaagcaacggc
ctgttcagtgaggtcgacctgaaccgtgagctgaagcagcaaaatcgcattacgccgcac
atcatcagccagatcgttgaatatgccgaaacgcgtaagggagtgatgattttcgcctcc
accgttgagcacgcccgtgaaattcatggcctgctgccgcccggagaagccgcactggtc
agcgccgaaacgcccgcagccgagcgtgatgcgctgattgaggctttcaaacaacagcaa
ttgcgctacctggtcaacgtggcggtgctgaccaccggttttgatgcaccgcatgtcgat
ctgatcgctattctgcgcccaaccgaatccgtcagcctgtatcagcaaatcgtcgggcgt
gggctgcggctggcccccggcaaggaagattgcctgatcctcgactacgccggtaacccg
cacgatctgtttaccccagaggtcggggtcagtaagccacacggcgacagtcagccggta
caggtgttctgccccggctgcggcttcgccaacctgttttggggcaaatgcaccgagaac
ggcgatatcatcgaacactacggtcgccgttgtcagggctggctggaggatgatgaaggc
catcgcgagcagtgcgattaccgcttccgcttcaagatttgcccgcattgcggcgctgag
aatgacattgccgcccgccgctgccaccagtgtcaggaagtcttggtcgatcctgacgat
atgctgaaggctgcgctgaagttgaaagacgctttggtattgcgctgtggcggcatggag
ctgcaaagcggccgtgatgaaaaaggcgagtggctgaaagccacttattacgacgaagac
ggcaccagcaccagtgaacgtttccggctacagaccccagcgcagcgcaaagccttcgaa
atgctgttcctgcgcccgcatcagcgtgcgccaggagtcccttttgcctggcaaaccgct
gccgacgtgctggcccagcaagcggccttgcgccatccggattttgtagtggcacgcaaa
cgcgggcagttctggcagatacgggaaaaagtgttcgattatcaaggccgcttccgccgt
gccaacgagctgtcttga
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