Streptomyces qinzhouensis: FQU76_04910
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Entry
FQU76_04910 CDS
T06686
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
sqz
Streptomyces qinzhouensis
Brite
KEGG Orthology (KO) [BR:
sqz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sqz03019
]
FQU76_04910
Enzymes [BR:
sqz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FQU76_04910
Messenger RNA biogenesis [BR:
sqz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FQU76_04910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
AAA_30
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QDY75971
UniProt:
A0A5B8J7U6
LinkDB
All DBs
Position
complement(1221316..1224144)
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AA seq
942 aa
AA seq
DB search
MTEDLSPAERYSAARVRAAEQATALAPFRELYEFDLDPFQIDACQALEAGRGVLVAAPTG
SGKTIVGEFAVHLALQQGRKCFYTTPIKALSNQKYADLAKRYGADKVGLLTGDNSVNSEA
PVVVMTTEVLRNMLYAGSQSLRGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTAVIVSEERPVPLWQHVMAGRRMYDLFEEESDHGGRGTGR
REVNPDLVRLARSENQRSYNPRDRRRGKMVREADRERERRSRSRIWTPGRPEVIERLDAE
GLLPAITFIFSRAACEAAVQQCLYAGLRLNDDTARLRVREIVEERTSAIPTEDLNVLGYY
EWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRAMDPAALAGLAGTRTYPLRSS
FRPSYNMAVNLVQQFGRHRSRELLETSFAQFQADRSVVGISRQVQKNETGLEGYREGMTC
HLGDFEEYARLRRELKDRENELAKHGAAQRRAAAAVSLEKLKPGDVIHVPTGKFAGLALV
LDPGIPAGRTNGHRGFEQHDGPRPLVLTAERQVKRLASMDFPVPVEPLERMRIPKSFNPR
SPQSRRDLASALRTKAGHIVPERHRKERSAAADDRDIARLRTELRAHPCHGCAEREDHAR
WAERYYRLQRDTRQLERRIEGRTNTIARTFDRIVALLTELDYLRADEVTPHGRRLARLYG
ELDLLASECLRDGVWEGLDPAELAACVSALVYESRQSDDAVAPKVPGGAAKAALGEMVRI
WGRLDALEEDFKINQAEGVGQREPDLGFAWAAYQWASGKSLDEVLRETEMPAGDFVRWTK
QVIDVLGQIAAAAPGEGSTVTKNARKAVDAVLRGVVAYSSVG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagatctctctcccgccgagcgctactccgccgcccgtgtccgggccgcggag
caggccaccgcgctggcccccttccgcgagttgtacgagttcgacctggaccccttccag
atcgacgcctgccaggcgctggaggccggccggggcgtgctcgtggccgcgcccaccggc
tcgggcaagaccatcgtcggcgagttcgccgtccacctcgccctccagcagggccggaag
tgcttctacaccacgcccatcaaagcgctgtccaaccagaagtacgccgacctcgccaag
cggtacggagccgacaaggtcggcctgctcaccggcgacaacagcgtcaactccgaggcg
cccgtggtcgtcatgaccaccgaagtgctgcggaacatgctgtacgcgggatcgcagtcg
ctgcgcggactcggctatgtcgtcatggacgaggtccactatctctccgaccgcttccgg
ggcgccgtctgggaagaggtgatcatccacctccccgaatcggtcaccctggtgtcactg
agcgccaccgtgtcgaacgccgaggagttcggcgactggctggacaccgtccgcggcgac
accgcggtgatcgtctccgaggagcggcccgttccgctctggcagcatgtgatggccggg
cggcggatgtacgacctcttcgaggaggagagcgaccacggcggccgcggcaccggccgc
cgcgaggtcaacccggacctggtccggctggcccggtcggagaaccagcgctcgtacaac
ccccgggaccggcgccgcggcaagatggtccgcgaggccgaccgggagcgggagcggcgc
agccggtcccggatctggacaccgggccgcccggaggtcatcgagcggctcgacgcggag
ggcctgctgcccgcgatcacgttcatcttcagccgcgcggcctgcgaggcggccgtccag
cagtgcctctacgccgggctgcggctcaacgacgacacggcccggctccgggtccgggag
atcgtcgaggagcggacgtccgcgatccccaccgaagacctcaacgtcctcggatactac
gaatggctggaaggcctcgaacgcggcatcgccgcccaccacgccggaatgctgcccacc
ttcaaggaggtggtcgaggaactgttcgtccgcggactggtgaaggcggtcttcgccacc
gagacactggcactcggcatcaacatgcccgcgcgctccgtcgtcctggagaagctcgtc
aagtggaacggcgaacagcacgccgacatcacccccggtgagtacacccagctcaccggg
cgggccgggcggcgcggcatcgacgtcgagggccatgcggtggtgctctggcagcgggcc
atggacccggccgcgctcgccggtctcgccggcacccggacctatccgctgcgctccagc
ttccggccctcgtacaacatggcggtcaatctggtccagcagttcgggcggcaccgctcg
cgcgaactgctggagacctccttcgcacagttccaggccgaccgctcggtcgtcggcatc
tcccgccaggtccagaagaacgagacgggcctggagggctaccgcgagggcatgacctgc
cacctcggcgatttcgaggagtacgcgcggctccgccgcgagctcaaggaccgggagaac
gagctggccaagcacggcgcggcccagcggcgcgcggcggcggcggtctccctggagaag
ctgaagccgggcgacgtcatccatgtaccgacgggcaagttcgccgggctggcgctcgtc
ctcgacccgggcatcccggccggccggaccaacggccaccgcggcttcgaacagcacgac
gggccccgcccgctggtcctcacggcggagcggcaggtcaagcggctggcgtcgatggac
ttcccggtgcccgtcgaaccgctggagcggatgcggatcccgaagtcgttcaatccgcgc
tccccgcagtcccggcgcgatctggcgtccgcactgcgcaccaaggccgggcacatcgtg
cccgagcggcatcgcaaggagcggtccgccgcggcggacgaccgcgatatcgcccggctg
cggacggagctgcgggcccatccgtgccacggctgcgccgagcgcgaggaccacgcccgc
tgggcggagcgctactaccgcctgcagcgggacacccgccagctggagcggcggatcgaa
ggccggacgaacaccatcgcccgcaccttcgaccggatcgtcgccctgctgaccgagttg
gactacctccgcgccgacgaggtcaccccgcacggccgccggctcgcccggctctacggc
gaactcgatctgctggccagtgaatgtctgcgggacggtgtatgggagggcctggacccg
gccgaactggcggcgtgcgtctccgcactggtctacgagtcacggcagtccgacgacgcg
gtcgcccccaaggtcccgggcggggccgcgaaggcggcgctcggcgagatggtccgcatc
tgggggaggctggacgccctggaggaggacttcaagatcaaccaggcggagggtgtcggc
cagcgcgagcccgacctcggcttcgcctgggccgcctaccagtgggcctcgggcaagagc
ctggacgaggtgctgcgggagacggagatgcccgcgggcgacttcgtccgctggacgaag
caggtcatcgacgtcctcggccagatcgcggcggcggcccccggggaggggagcacggtc
acgaagaacgcccgcaaggcggtggacgcggttctgaggggcgtcgtggcctacagctcg
gtgggttag
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