Streptomyces qinzhouensis: FQU76_09415
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Entry
FQU76_09415 CDS
T06686
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
sqz
Streptomyces qinzhouensis
Pathway
sqz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sqz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FQU76_09415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sqz03019
]
FQU76_09415
03009 Ribosome biogenesis [BR:
sqz03009
]
FQU76_09415
Enzymes [BR:
sqz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FQU76_09415
Messenger RNA biogenesis [BR:
sqz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FQU76_09415
Ribosome biogenesis [BR:
sqz03009
]
Prokaryotic type
rRNA processing factors
FQU76_09415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QDY76714
UniProt:
A0A5B8J8E0
LinkDB
All DBs
Position
complement(2258886..2262800)
Genome browser
AA seq
1304 aa
AA seq
DB search
MHEPNEPGTTGTTPDSNSPSDTLPPRRRRAASRPAGPPAASNAEGSAAPVAETAAAEEAP
APRARRRATRKATVAEPVEAEAVEVAEEAPAPRARRRATRKATAAEPVEAVEAAAEPVAE
VVAEEAPAPRARRRATRKATAPEPVEAEAVEVAVEPVAEEAPAPRARRRATRKATSAEPV
EAVEAAAEPVAEVVAEEAPAPRARRRATRKATAPEPVEAEAVEVAAEPVAEEAPAPRARR
RATRKATAPEPAAQAEADGSGETLPGATVAEITAHEDQVAAAETAAGRGRGRRRVVTPQF
TAERPAEPTARRAARPAVAVFQAPVFSEPMFQTPETAAAAAAVVYEEPRTEEAAPPADEA
EPETAEETTETAEAVVEAAPEPAGRRRRRRRGEAPEQAERSVAQPADEAETEAAADEAEA
EAEAEAEAEEHDEYEDRPSRRRRRGGRRRRRGEAPDSAEQSDETGDGEATPAAEDTDEDI
AEDGEDTEQDEAAGFGSASSRRRRRRRRRSGEPSLDEEPGDGDPERTVVKVREPRARTRE
EASDEVQSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVRQSGER
TQIGVMEDNVLVEHYVNKEQSTSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEV
NFEALGMAHGPRRIESALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEGSMT
GISRKLPDTERARLKTILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQSQWEDIKKKA
KSGNAPTLLYGEPDMTVRVVRDIFNEDFSKVIVSGDEAWETVHGYVAHVAPDLTDRLQRW
TSEVDVFATYRIDEQLMKALDRKVWLPSGGSLVIDKTEAMIVVDVNTGKFTGQGGNLEET
VTRNNLEAAEEIVRQLRLRDLGGIVVVDFIDMVLESNRDLVMRRLLECLGRDRTKHQVAE
VTSLGLVQMTRKRVGQGLLESFSETCVHCNGRGVIVHMDQAASAGGGGGGKRSKKRGRGG
DAAAAHDHTAEAHEHEHEHEHETAEEVAAEVAAPVALAEPVFVPDEELYNSAAEAEAAAQ
RGRGRRRATRRASAPGGAPKAAQPKAPEPEPQPEPVVEAAVPEAVEEPREAAAPETAPAG
RGRRRATRKASAPAGSPKAADAPEAEVVVVAKAPEAPAQAEPSAPADAPEPAAAPPRARR
RVVRKVTAPAGSPSGAGTDESGAVVVIGTAPEGTAAAESAEEAAPAKKAARKTAKKATAK
KAATKKTAAKKSAAKKTTAKKATAKKTAAAEKSAPATVTAVTEG
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagccgaacgaacccggtaccaccgggaccacccctgattcgaacagccccagc
gacacgctgccgccgcgccgccgccgcgccgcgtcccgcccggccggacccccggccgcg
agcaacgccgaaggctccgccgcaccggtcgcggagaccgctgccgctgaggaggcgcct
gcgccgcgtgcgcgtcgtcgggccacccgtaaggcgacggttgccgagccggtcgaggct
gaagccgtagaggttgccgaggaggcgcccgcgccgcgtgcccgtcgtcgggcgacgcgt
aaggccactgccgctgagccggtagaggccgttgaggccgctgctgagccggttgctgag
gttgtcgccgaggaggcgcctgcgccgcgtgcgcgtcgtcgggccacccgtaaggccacc
gcccccgagccggtcgaggctgaggcggtagaggttgccgtcgagccggtcgccgaggag
gcgcctgcgccgcgtgcccgtcgtcgggcgacgcgtaaggccacttccgctgagccggtc
gaggccgttgaggccgctgctgagccggtcgcggaagttgtcgctgaggaggcgcctgcg
ccgcgtgcgcgtcgtcgggccacccgtaaggccaccgcccccgagccggtcgaggctgag
gcggtagaggttgccgccgagccggtcgctgaggaggcgcctgcgccgcgtgcgcgtcgt
cgggccacccgcaaggccaccgcccccgagccggccgcccaggccgaggccgacggcagc
ggagagaccctgcccggcgccaccgtcgccgagatcaccgcccacgaggaccaggtcgcc
gccgccgagaccgccgccggccggggccggggccgccgccgcgtcgtgacgccgcagttc
accgccgagcggcccgccgagccgaccgcgcgccgcgccgcccggcccgccgtcgccgtc
ttccaggcacctgtcttctccgagccgatgttccagaccccggagacggccgccgccgct
gccgccgtggtgtacgaggagccgcgcaccgaggaggccgcaccgcccgccgacgaagcc
gagcccgagacggccgaggagaccaccgagacggcggaagccgtcgtcgaggccgccccc
gagcccgccggccgccggcgccgtcgccgtcgcggcgaggcccccgagcaggccgagcgg
tccgtcgcccagcccgccgacgaagccgagaccgaagcggcggccgacgaggccgaagcc
gaggccgaggcagaggcggaggccgaggagcacgacgagtacgaggaccggccctcgcgc
cgccgccgccggggcggccgccgccgccgtcgcggcgaggcccccgactcggccgagcag
tccgacgagaccggggacggcgaagccaccccggccgccgaggacaccgacgaggacatc
gccgaggacggcgaggacaccgagcaggacgaggccgccggcttcggctccgccagcagc
cgtcgccgccggcgccggcgccgtcgcagcggtgagccctccctcgacgaggagccgggc
gacggcgacccggagcgcacggtcgtcaaggtccgcgagccccgggcccgtacccgcgaa
gaagcctccgacgaggtccagtccatcaagggctccacccgcctggaggcgaagaagcag
cgccgccgcgagggccgggagcagggccgccgccgcgtcccgatcatcaccgaggccgag
ttcctcgcccgccgcgaggccgtcgagcgggtcatggtcgtccgccagagcggcgagcgc
acccagatcggcgtcatggaggacaacgtcctcgtcgagcactacgtcaacaaggagcag
tcgacgtcgtacgtcggcaatgtctacctgggcaaggtgcagaacgtcctgccgtcgatg
gaggccgccttcgtcgatatcggcaagggccgcaacgccgtgctgtacgcgggtgaggtc
aacttcgaggcgctcggcatggcccacggcccccgccgcatcgagtccgcgctgaagtcc
ggccagtccgtgctggtccaggtcaccaaggacccgatcggccacaagggcgcccggctc
accagccaggtctccctccccggccgctatctggtctacgttcccgagggctcgatgacc
gggatcagccgcaagctgcccgacaccgagcgggcccggctgaagaccatcctcaagaag
atcgtccccgaggacgcgggcgttatcgtgcgcaccgccgccgagggcgccagcgaggac
gagctgcgccgcgatgtcgagcggctccagtcgcagtgggaggacatcaagaagaaggcg
aagagcggcaacgcgcccacgctgctctacggtgagccggacatgaccgtccgggtcgtc
cgcgacatcttcaacgaggacttctccaaggtcatcgtcagcggtgacgaggcctgggag
accgtccacggctatgtcgcgcatgtcgcgcccgatctgaccgaccggctccagcgctgg
accagcgaggtcgacgtcttcgccacctaccgcatcgacgagcagctgatgaaggcgctg
gaccgcaaggtctggctgcccagcggcgggtcactggtgatcgacaagaccgaagccatg
atcgtggtcgatgtcaacaccggtaagttcaccggtcagggcggcaatctggaagagacc
gtcaccaggaacaacctggaggcggccgaggagatcgtgcgccagctgcggctgcgcgac
ctcggcggcatcgtcgtcgtcgacttcatcgacatggtgctggagtccaaccgcgatctg
gtgatgcgacggctgctcgagtgcctgggccgggaccggaccaagcaccaggtcgccgag
gtcacctcgctgggcctggtccagatgacccgtaagcgggtcggccaggggctgctggag
tccttctccgagacctgtgtccactgcaacggccgcggtgtgatcgtgcacatggaccag
gccgcgtccgccggtggcgggggcggtggcaagcggtccaagaagcgcggccgcggcggc
gatgccgcggcggcgcacgaccacaccgccgaggcccacgaacacgaacacgagcacgag
cacgagacggccgaagaggtggccgccgaggtcgccgcgccggtcgcgctcgccgagccc
gtcttcgtacccgacgaggagctgtacaacagcgccgccgaggccgaggccgccgcccag
cgcggccgtggccgccgccgggccacccgcagggcgtccgcgcccggtggtgccccgaag
gccgcgcagccgaaggccccggagccggagccgcagccggagccggtggtggaggccgcc
gtacccgaggccgtcgaggagccgcgggaggccgcggcgcccgagaccgccccggccggc
cgtggccgccgccgggcgacccgtaaggcatccgccccggccggttcgccgaaggccgcc
gacgcccccgaggccgaggtcgtcgtcgtggcgaaggcccccgaggcaccggcgcaggcc
gagccgtccgccccggcggacgcgcccgagccggccgccgcgcccccgcgggcgcgccgc
cgggtggtccgcaaggtcaccgctccggccggctccccgtcgggcgccggtacggacgag
tccggcgcggtcgtcgtgatcggcaccgctccggagggcaccgcggccgccgagtccgcg
gaagaggccgccccggccaagaaggcggcccgcaagaccgccaagaaggccaccgcgaag
aaggccgccaccaagaagacggcggccaagaagagcgcggcgaagaagacgaccgcgaag
aaggcgaccgccaagaagaccgccgcggccgagaagtcggcgcccgcgaccgtgacggcg
gtcaccgaggggtga
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