Streptomyces qinzhouensis: FQU76_23755
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Entry
FQU76_23755 CDS
T06686
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sqz
Streptomyces qinzhouensis
Pathway
sqz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sqz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FQU76_23755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sqz03021
]
FQU76_23755
03019 Messenger RNA biogenesis [BR:
sqz03019
]
FQU76_23755
Transcription machinery [BR:
sqz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FQU76_23755
Messenger RNA biogenesis [BR:
sqz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FQU76_23755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDY79031
UniProt:
A0A5B8JGP6
LinkDB
All DBs
Position
5420079..5422082
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AA seq
667 aa
AA seq
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MSDTTDLMGVTADTSVDTSAPAAGAASGTTSRRRRSGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGGAAAKKTAEPAAKTAEVKPKRRATSKARTSDAAAEAAPAAE
EKAAQPAGKAEKAVAQQQIDIPGQPVSDDQPTVERRRRRATAQAGSPEVQAEGAVAVKEA
KEVSRTESQDGSAGASGQDGEGRKDRGERGQRGDRGDRRDRQRGRGKGDEQQGGQSRQQG
SQRQPQPQSGPQDDFDDDGSRRGRRGRYRDRRGRRGREEFAAGDVQVSDDDVLIPVAGIL
DILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVRQPKDGERREKFNALVR
LDSVNGMAPESGRGRPEFNKLTPLYPQDRLRLETDPGVLTTRIIDLVSPIGKGQRGLIVA
PPKTGKTMILQAIANAITVNSPECHLMVVLVDERPEEVTDMQRSVKGEVISSTFDRPAED
HTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALYPPK
RFFGAARNIEDGGSLTILATALVDTGSRMDEVIFEEFKGTGNMELKLDRKLSDKRIFPAV
DVDASSTRKEEILLGSEELAIVWKLRRVLHALDQQQAIELLLDKMKQTKSNAEFLLQIQK
TTPSAND
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgtgactgccgacaccagcgtcgacacttccgcg
cccgccgcaggtgctgcctcaggcaccacctcccggcgccgccgctccggcaccggcctt
gagggcatggttctggccgagttgcagcaggtcgcgtccggcctcgggatcaggggcacc
gcgcggatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggccggcggcgga
gccgcggccaagaagaccgccgagccggcggccaagaccgccgaggtcaagcccaagcgc
cgggccacctcgaaggcgcgtacgagcgatgccgccgccgaggccgccccggccgccgag
gagaaggccgcacagcccgccggcaaggccgagaaggccgttgcccagcagcagatcgac
attccgggacagccggtcagcgatgaccagccgaccgtcgagcgccgccgccgccgcgcc
accgcgcaggcgggcagccccgaggtccaggccgagggcgccgtcgcggtcaaggaggcc
aaggaggtctcccgtaccgaatcgcaggacggatccgccggtgcctccgggcaggacggc
gagggccgcaaggaccgcggcgagcgtggccagcgcggtgaccgcggtgaccgccgtgac
cgtcagcgcggccgtgggaagggcgacgagcagcagggcggtcagagccggcagcagggc
agccagcgtcagccgcagccgcagagcggaccgcaggacgacttcgacgacgacggcagc
cgccgcggtcgccggggccgttaccgcgaccgtcgcggccggcgcggccgtgaggaattc
gccgcgggcgatgtgcaggtttccgacgacgatgtgctgatccccgtcgcgggcatcctc
gacatcctcgacaactacgccttcattcgcacctcgggctacctcccgggtccgaacgat
gtgtacgtctccctggcccaggtccgcaagaacggtctgcgcaagggcgatcacgtcacg
ggcgcggtccggcagcccaaggacggcgagcgccgcgagaagttcaacgcgctggtccgc
ctcgactcggtcaacggcatggcccccgaatcggggcgcggccgaccggagttcaacaag
ctgaccccgctctacccccaggaccggctccgtctggagaccgaccccggtgtgctgacg
acccggatcatcgacctggtgtcgccgatcggcaagggccagcgcggtctgatcgtggcc
ccgccgaagaccggcaagaccatgatcctgcaggcgatcgccaacgccatcacggtcaac
agccccgagtgccatctgatggtcgtcctcgtcgacgagcggcccgaagaggtcaccgac
atgcagcggtcggtcaagggcgaggtcatctcctcgaccttcgaccggcccgccgaggac
cacaccaccgtcgccgaactcgccatcgagcgcgccaagcgcctggtggagctgggtcat
gacgtggtcgtcctgctggactccatcacccgcctgggccgcgcctacaacctggccgcg
cccgcctccggccgcatcctgtccggtggtgtcgactcgaccgcgctctacccgccgaag
cgcttcttcggtgccgcgcgcaatatcgaggacggcggctcgctgaccatcctggccacc
gcgctggtcgacaccggctcgcggatggacgaggtgatcttcgaggagttcaagggcacc
ggcaacatggagctgaagctcgaccggaagctctccgacaagcgcatcttcccggcggtg
gacgtggacgcgtccagcacccgcaaggaggagatcctgctcggcagcgaggagctcgcc
atcgtctggaagctgcgccgggtgctgcacgcgctcgaccagcagcaggcgatcgaactg
ctgctggacaagatgaagcagacgaagtcgaacgcggagttcctgctccagatccagaag
acgacgccgtcggccaacgactga
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