Streptomyces qinzhouensis: FQU76_25935
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Entry
FQU76_25935 CDS
T06686
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sqz
Streptomyces qinzhouensis
Pathway
sqz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sqz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FQU76_25935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sqz03019
]
FQU76_25935
03400 DNA repair and recombination proteins [BR:
sqz03400
]
FQU76_25935
Enzymes [BR:
sqz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FQU76_25935
Messenger RNA biogenesis [BR:
sqz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FQU76_25935
DNA repair and recombination proteins [BR:
sqz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FQU76_25935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QDY79397
UniProt:
A0A5B8JD26
LinkDB
All DBs
Position
complement(5926729..5928909)
Genome browser
AA seq
726 aa
AA seq
DB search
MTHADLADPADLRTSADAVLARLVSDHTGAARLREDQWLAIEALVAHRRRALVVQRTGWG
KSAVYFVATSLLRQRGAGPTVIVSPLLALMRNQVDAAARAGIRARTINSSNQEEWDAVKA
EVASGDVDVLLVSPERLNNPDFRDQVLPELSAATGLLVVDEAHCISDWGHDFRPDYRRLR
TMLAELPADVPVLATTATANTRVTADVAEQLGTGAGTDALVLRGPLDRESLSLGVLRLPD
AATRLAWLADHIGELPGSGIVYTLTVAAAEEVTAYLRQCGHTVASYTGRTENAERQQAED
DLLANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLP
GREDEAIWQYFASVGFPSEDLVRRTLDVLARSDRPLSLPALEPLVDLRRTRLETMLKVLD
VDGAVRRVKGGWTATGRPWVYDAERYARVARQREVEQQAMREYALSTGCRMEFLRRQLDD
SEAVPCGRCDNCAGSRFSDKVSDSALDTARGELGRPGVEVEPRRMWPTGMAAVGIPLKGR
IPEGEQTFPGRALGRLSDIGWGNRLRPMLTPQAPDVPVPDDVADAVVTVLADWAKGPGGW
ASGAPDAPARPVGVVTVASRTRPQLIGSLGTRIAGIGRMPLLGSVEYTPDGTGARPSRSN
SAQRVRALHEAFTVPAPLAAALAAADGPVLLVDDLSDTGWTLAVAARLLRKSGARGVFPL
VLAVQG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgcagacctcgcggatcccgcggacctcaggacctcggccgacgccgtgctc
gcccgtctcgtctccgaccacaccggtgcggccaggctgcgcgaggaccagtggctggcc
atcgaggcgctggtggcgcaccggcgcagggccctggtcgtccagcgcaccggctggggc
aagtccgcggtgtacttcgtcgcgacgtccctgctgcggcagcggggcgcgggcccgacc
gtgatcgtctctccccttctcgcgctcatgcggaatcaggtggatgcggcggcccgggcc
ggtatccgcgcccgcacgatcaactcgtccaatcaggaggagtgggacgcggtcaaggcc
gaggtcgcctccggcgacgtggatgtactgctggtcagccccgagcggctgaacaatccc
gacttccgcgaccaggtcctgcccgagctgtccgccgcgacagggctgctggtggtggac
gaggcacactgcatctccgactggggccacgacttccgcccggactaccgcagactccgc
acgatgctggcggagctgcccgccgacgtccccgttctcgcgaccacggcgacggccaac
acccgggtcacggctgatgtcgccgagcagttgggcacgggcgcggggaccgacgccctc
gtcctgcgcgggccgctcgaccgggagagcctgagtctcggggtgctgaggctgcccgat
gccgcgacccggctcgcctggctcgccgaccacatcggcgagctgccgggctccggaatc
gtctacaccctcacggtggccgccgccgaggaggtcaccgcctatctgcgccagtgcggc
cacacggtcgcctcgtacaccgggcgcacggagaacgccgagcggcagcaggccgaggac
gatctgctcgccaaccgcgtcaaggcgctcgtcgccacttcggcgctgggcatgggattc
gacaagccggacctcggcttcgtggtgcatctcggctcaccgtcctcgcccatcgcgtac
taccagcaggtgggccgggccggccgcggggtggagcacgcggaggtactgctgctgccc
ggccgggaggacgaggccatttggcagtacttcgcctcggtcggcttcccctccgaggat
ctcgtgcgccggacgctcgacgtgctggcccggtccgaccgcccgctgtccctgcccgcg
ctggaacccctcgtcgacctgcggcgcaccaggctggagaccatgctcaaggtcctcgac
gtggacggggccgtgcggcgggtcaagggcggctggaccgccaccggccgcccctgggtg
tacgacgcggagcggtatgcccgggtcgcccgtcagcgcgaagtcgagcagcaggcgatg
cgggagtacgcgctgtcgacgggctgtcggatggagtttctgcgacgccagttggacgac
tccgaagcggtcccctgtggccggtgcgacaactgcgcgggaagccggttcagcgacaaa
gtctccgattccgccctggacacggcacgcggcgagctggggcggcccggtgtcgaggtg
gagccgcgccggatgtggcccaccggtatggcggcggtgggcatccccctcaagggccgg
atccccgaaggggagcagaccttccccggccgcgcgctgggacgtctctccgatatcggc
tggggcaaccgcctccgtccgatgctgacaccgcaggcgccggacgtcccggtgcccgac
gatgtcgcggatgcggtggtgaccgtgctcgccgactgggcgaagggtcccggagggtgg
gcatccggggcgccggacgcccccgcccggcccgtcggtgtggtcactgttgcctcccgc
accaggccgcagctgatcgggtcgctcggcacccggatcgccggtatcggccggatgccg
ctgctgggctccgtcgagtacaccccggacggaacgggggcccggccttcccggtccaac
agcgcccagcgtgtgcgagccctgcacgaggcgttcaccgtcccggcccccctcgccgcg
gccttggcggcggccgacggaccggtactgctcgtcgacgacctttcggacaccggctgg
acccttgctgtcgcggcccggctgctgcggaaatccggtgcgaggggggtgtttccgctg
gtcctcgcggttcaagggtga
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