Serratia sp. AS13: SerAS13_0146
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Entry
SerAS13_0146 CDS
T02012
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sra
Serratia sp. AS13
Pathway
sra03420
Nucleotide excision repair
sra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SerAS13_0146
03430 Mismatch repair
SerAS13_0146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sra03400
]
SerAS13_0146
Enzymes [BR:
sra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SerAS13_0146
DNA repair and recombination proteins [BR:
sra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SerAS13_0146
MMR (mismatch excision repair)
Other MMR factors
SerAS13_0146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
AEG25969
UniProt:
A0A7U3YY11
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All DBs
Position
171893..174064
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AA seq
723 aa
AA seq
DB search
MVPMDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSI
MAVTFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSD
DQFRLLKRIVKALNIDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAY
QEACDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNSIQYAWIRLLS
GNNSNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAQTVRLEQNYRSTSNILKAANTLI
ANNGGRMGKNLWTEGAEGEPISIYCAFNELDESRFVVGRIKTWQENGGALNDCAILYRSN
AQSRVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRG
IGDRTLDEVRRTARDRQLTLWQATRALLQDKVLAGRAASALQRFTELVDSLAHETADMPL
HVQTDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQYSYQDEDQDLMPLQAFLSH
AALEAGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERR
LAYVGLTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEDCVEEVRLRASVSRPVNHR
RMGTPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARL
ETV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctatggacgtttccgatctgctcgacagcctgaatgaaaaacaacgcgaagcc
gtggcggcgccacgctgcaacctgttggtgttggccggcgcgggcagcggtaaaacccgg
gtgctggtacatcgcatcgcctggctgctgtcggtagagaactgctcgccgtattcgatt
atggcggtgacgttcaccaacaaagcggcggcggaaatgcgccaccgtatcgaacacctg
attggcaccagccagggcggcatgtggatcggcaccttccacggcctggctcaccggttg
ctgcgcgcccaccatatggacgccaatctgccgcaggatttccaaatcctcgacagcgac
gaccagtttcgcctgctgaagcgcatcgttaaggcgctgaatatcgacgaaaaacaatgg
ccgccgcgtcaggcgatgtggtacatcaacggcaaaaaagacgagggcctgcgcccgcag
cacgttgaaacctataacaacccggtggaagcgacctggttgcgtatctatcaggcctat
caggaagcttgcgaccgtgccgggctggtggactttgccgaactgctgctgcgcgcccat
gagctgtggctgaacaagccgcatatcctcaatcactaccgcgagcgctttaccaacgta
ttggtggacgagttccaggataccaacagcatccagtacgcctggatccgcctgctgtcc
ggcaataacagcaacgtgatgatcgtcggcgacgatgaccagtcaatttacggctggcgc
ggcgctcaggtggaaaacatccagcgcttcctgaaggatttccccggtgcgcaaaccgtg
cgcctggaacagaactaccgttcgaccagcaatatcctgaaggccgccaataccttgatc
gccaacaacggcgggcgcatgggtaaaaacctgtggaccgagggggccgaaggcgaaccc
atatccatttattgcgcgttcaacgaactcgacgagtcgcgctttgtcgtcggccgcatc
aaaacctggcaggaaaacggcggtgcgctgaatgactgcgcgatactctaccgcagcaat
gcccagtcgcgcgtgctggaagaggcgctgttgcaaacggccatgccgtaccgcatttat
ggcgggcagcgcttcttcgaacgtcaggaaatcaaggatgcgctggcctatttacggctg
atcgccaaccgtaacgacgacgcggcgtttgagcgcgtggtgaataccccgacgcgcggt
attggtgaccgaacgctggacgaagtgcgccgcacggcgcgcgatcgccaactgacgctg
tggcaggccacccgtgcgctgttgcaggacaaagtgctggccgggcgtgcggcgtccgcg
ctgcaacgttttaccgaattggtggattccctggcgcacgaaaccgcagatatgccgctg
catgtgcagaccgaccgggtgatccgcgattcggggctgttcatcatgtacgagcaggag
aagggtgaaaaaggtcaggcgcgtatagaaaacctcgaggaactggtgacggcgacgcgg
cagtacagctatcaggatgaagatcaggatctgatgccgctacaggcgtttctgtcgcat
gccgcgctggaggcgggcgaggggcaggcagatgcttaccaggatgcggtgcaactgatg
accctgcactccgccaaggggctggagtttccgctggtgtttatcgtcggtatggaagag
gggatgttcccgagccagatgtcgctggacgaaggcgggcgattggaagaagagcgccgg
ctggcctacgttggcctgacgcgcgccatgcagaaattgacgctgacctatgccgaaacg
cgccgtttgtacggcaaagaggtttatcaccggccttcacgttttatcggcgaactgccg
gaagactgtgtggaagaagtgcggctgcgcgccagcgtatcgcggccagtgaatcaccgc
cgcatgggcacgccgatcagcgaaaacgacaccggctacaagcttggccagcgggtgcgc
catcccaagtttggcgagggtaccatcgtcaatctggaaggcagcggcgaacacagccgg
ttgcaaattgcgtttccgggcgaaggcatcaagtggctggtggcggcctacgcccggctg
gagacggtataa
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