Serratia sp. AS13: SerAS13_0348
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Entry
SerAS13_0348 CDS
T02012
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sra
Serratia sp. AS13
Pathway
sra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SerAS13_0348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sra03019
]
SerAS13_0348
03110 Chaperones and folding catalysts [BR:
sra03110
]
SerAS13_0348
03029 Mitochondrial biogenesis [BR:
sra03029
]
SerAS13_0348
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sra04147
]
SerAS13_0348
Enzymes [BR:
sra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SerAS13_0348
Messenger RNA biogenesis [BR:
sra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SerAS13_0348
Chaperones and folding catalysts [BR:
sra03110
]
Heat shock proteins
HSP60 / Chaperonin
SerAS13_0348
Mitochondrial biogenesis [BR:
sra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SerAS13_0348
Exosome [BR:
sra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SerAS13_0348
Exosomal proteins of other body fluids (saliva and urine)
SerAS13_0348
Exosomal proteins of breast cancer cells
SerAS13_0348
Exosomal proteins of colorectal cancer cells
SerAS13_0348
Exosomal proteins of bladder cancer cells
SerAS13_0348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEG26164
LinkDB
All DBs
Position
394426..396069
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDLGTAKRIVINKDTTIIIDGNGEETAIQGRVSQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAASKLSELRGVNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKAGEGNYGYNA
ATEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggcaatgacgctcgcgtgaaaatgctccgcggcgtg
aatgttctcgctgatgcagtaaaagtgaccctgggcccgaaaggccgtaacgtagtgctg
gataaatccttcggcgctcctaccatcactaaagatggcgtatccgttgcccgtgaaatc
gaactggaagacaagtttgaaaacatgggtgcgcagatggtgaaagaagtggcctccaaa
gcgaacgacgctgcgggcgacggcaccaccactgcaaccgtactggctcaatccatcatc
accgaaggcctgaaagcagtcgctgccggcatgaacccgatggatctgaagcgcggtatc
gacaaagcggttatcgccgctgttgaagagcttaaaaaattatccgtaccttgctctgac
tccaaagctatcgctcaggtaggcaccatctctgcaaactccgacgaaaccgtgggtaaa
ctgattgcagaagccatggagaaagtgggcaaagaaggcgttatcaccgttgaagaaggc
actggcctgcaagacgagctggacgttgttgaaggtatgcagttcgaccgcggttacctg
tctccgtacttcatcaacaaaccagaaaccggctctatcgaactggaaagcccgttcatc
ctgctggctgacaaaaaaatctccaacatccgtgaaatgctgccagtactggaagccgtg
gcgaaagccggcaaaccactgctgatcatcgctgaagatgttgaaggcgaagcgctggct
accctggtggttaacaccatgcgcggcatcgtgaaagtggctgcggttaaagcacctggt
ttcggcgaccgtcgtaaagccatgctgcaggatatcgctaccctgactggcggtaccgtt
atctctgaagagatcggtctggagctggaaaaagcgactctggaagacctgggtactgct
aaacgtatcgttatcaacaaagacaccactatcatcatcgatggcaatggtgaagaaact
gcgattcagggccgtgtgtcccagattcgtcagcagatcgaagaagcaacttctgattac
gaccgtgaaaaactgcaagagcgcgtagctaaactggctggcggcgttgcggtaatcaaa
gtcggtgctgctaccgaagttgaaatgaaagagaagaaagctcgcgttgaagatgctctg
cacgcaacccgtgctgcggtagaagaaggcgtagttgctggtggcggtgttgcgctgatt
cgcgcagcgtccaagctgagcgaactgcgtggcgtgaacgaagatcagaacgtgggtatc
aaagttgcgctgcgcgcaatggaatcaccactgcgtcagatcgttctgaactgcggcgaa
gagccctctgttgttgccaacaccgtgaaagcgggcgaaggtaactacggttacaacgca
gcaactgaagaatacggcgacatgatcgcgatgggtatcctggatccaaccaaagtaacc
cgttctgctctgcagtacgcggcttctgtggctggcctgatgatcaccaccgagtgcatg
gtgaccgacctgccgaaaggcgatgcacctgatttaggcgctggcggtatgggcggcatg
ggtggcatgggcggcatgatgtaa
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