Serratia sp. AS13: SerAS13_1887
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Entry
SerAS13_1887 CDS
T02012
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
sra
Serratia sp. AS13
Pathway
sra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SerAS13_1887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sra03400
]
SerAS13_1887
DNA repair and recombination proteins [BR:
sra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SerAS13_1887
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AEG27673
UniProt:
A0A7U3Z109
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All DBs
Position
complement(2041495..2042163)
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AA seq
222 aa
AA seq
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MILRVIDTETCGLDGGVVEVASVDLIDDHIANPMSDLVSPDRPISIDAMAIHHITEQMVE
GKPRIAVAIGRYLGSPYYVAHNAAFDRGVLPEMRGAWICTMKLARTLYPDIKYGNQYLRY
ALNLEVQLPQDTTLYPHRALYDCYVTAALLQRIVKDSGWTPEQMAQITEQPVLLKKFKFG
KYRGQEIDRIAQEDPGYLRWMLKSIEDLSPDMKHTLKYYLIG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgattttacgcgtaattgacactgaaacctgcgggctggacggcggcgtggtggaagtc
gcctccgttgacctgatagacgaccacatcgccaatccgatgagcgatttggtcagcccc
gatcggcccatcagcattgatgcgatggctatccatcacatcaccgaacagatggtcgag
ggtaagccgcgtatcgcggtggcgatcggccgctatctgggtagcccttactatgtggcg
cacaacgcagcgtttgatcgcggcgtgctgccggaaatgcgcggtgcctggatatgcacc
atgaagctggcgcgcaccctttacccggacatcaaatacggcaaccagtatctgcgctat
gcgttgaatctggaggtgcaactgccgcaagacaccacgctgtacccgcaccgggcgctg
tacgattgctacgtaaccgctgcgctgctgcaacgcatcgtcaaggattcagggtggacg
ccggaacaaatggcgcaaatcaccgaacagccagtgctgctgaagaaattcaaattcggc
aaatatcgtgggcaggaaattgatcgcattgcgcaggaagatcccggctatctgcgctgg
atgttgaagtccatcgaggatctcagcccggacatgaagcatacgttgaaatactatctg
atcggctaa
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