Serratia sp. AS13: SerAS13_2653
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Entry
SerAS13_2653 CDS
T02012
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sra
Serratia sp. AS13
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sra03032
]
SerAS13_2653
03400 DNA repair and recombination proteins [BR:
sra03400
]
SerAS13_2653
Enzymes [BR:
sra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SerAS13_2653
DNA replication proteins [BR:
sra03032
]
Prokaryotic type
DNA Topoisomerases
SerAS13_2653
DNA repair and recombination proteins [BR:
sra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SerAS13_2653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AEG28430
UniProt:
A0A7U4DWY1
LinkDB
All DBs
Position
complement(2853298..2855895)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTEDKAKKKVK
KDEKTALVNRMGVDPYHGWKADYEILPGKEKVVAELKSLAENADHIYLATDLDREGEAIA
WHLREVIGGDEKRFSRVVFNEITKNAIQQAFKQPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVERERDIKAFVPEEYWELHADLLAKNDTALQMEVTH
AHDKPFKPVNREQTHAALKLLEKARYTVLDREDKPTSSKPGAPFITSTLQQAASTRLSFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDALNMVRGYIGDNFGDKYLPKAPNQYSSKEN
SQEAHEAIRPSDVNVLAEQLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLSVKAGDY
QLRAKGRTLRFDGWTKVMPALRKGDEDRTLPYVEVGSDLELQKLIPSQHFTKPPARYSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVESRRFYAEKMGEIVTDRLEENFRELMNY
DFTARMEDGLDQVANNHAEWKAVLDEFFAEFSEQLETAEKDPEDGGMRPNQMVMTSIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPETEVLNILEGDDAETNALRARH
RCQKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIEEGEFRLKGYDGPVVECDKCGSEMHL
KMGRFGKYMGCTNETCKNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELARFKDRLPEKLRYLADAPVADGEGNKTMVRFSRKTKQQYV
SSEKDGKATGWSAFYVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtaatagttgagtccccggcaaaagccaaaactattaataaatac
ttaggtaatgactacgtggtgaagtccagcgtcggtcatatccgtgatttgccgaccagt
ggctcagccagcaaaaagagcgctgactcaaccgaagacaaagccaagaagaaagttaaa
aaagatgagaaaacggcgctggtaaatcgaatgggcgtcgatccttaccatggctggaaa
gcggattatgaaattctgccaggtaaagaaaaagttgtcgcagagttaaaatcgttagcg
gaaaacgccgaccacatttatctcgcaacggaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtgatcggcggcgacgagaaacgctttagccgcgtggtgttcaac
gaaatcaccaagaacgcgatccaacaggcctttaaacagccgggtgagttgaatatcgat
cgtgttaacgcacaacaggcgcgtcgctttatggaccgcgtggtgggttacatggtatcg
ccgctgctgtggaaaaaaattgcccgcggcctgtccgctgggcgcgtgcaatctgttgcg
gtacggttggtggtggagcgcgaacgcgacatcaaagccttcgtaccggaagagtactgg
gagctgcacgccgatctgctggcgaagaatgatactgcgctgcagatggaagtgacgcat
gcccacgacaaaccgttcaaaccggttaaccgtgagcagacccacgccgccctcaaattg
ctggagaaagcccgttatacggtgctggatcgcgaagacaaacctaccagcagcaagccg
ggcgcgcctttcattacctcgacgctgcaacaggcggccagcacccgtctgagttttggc
gtgaagaaaaccatgatgatggctcagcggctgtatgaagccggtcacatcacctacatg
cgtactgactccaccaacctgagccaggatgcgctcaacatggtgcgtggctatatcggc
gacaatttcggcgacaagtacctgccgaaagcgccaaaccagtacagcagcaaagaaaac
tcgcaggaagcgcacgaagctatccgcccgtcggacgtgaacgtgctggccgagcagttg
aaagatatggaagcggatgcgcaaaagctgtatcagctgatctggcgccagttcgtggcc
tgtcagatgacgcctgcgcagtacgattccactacgctgtctgtgaaggccggtgattat
cagctgcgtgccaaaggccgtacgctgcgtttcgatggttggaccaaagtgatgcctgcc
ctgcgcaagggtgatgaagaccgcaccttgccgtatgttgaagtcggcagcgatctggaa
ctgcaaaagctgatcccgagccagcacttcaccaagccgcctgcgcgttacagcgaagcc
tcgttggtgaaagagctggaaaaacgcggtattggccgtccatcgacctatgcgtcgatc
atctcgaccattcaggaccgtggctatgtgcgggtcgaaagccgccgtttctacgccgag
aaaatgggtgagatcgttactgatcgtctggaagaaaacttccgtgagctgatgaactat
gactttacagcgcgcatggaagacggcctcgaccaggtagccaataaccacgccgagtgg
aaagcggtgctggatgagttttttgccgagttcagtgaacagttggaaacggcggagaaa
gatcctgaagacggcggtatgcgcccgaatcagatggtcatgaccagcatcgattgccca
acctgcggccgtaaaatgggcatccgtaccgccagtaccggcgtcttcctcggttgttcc
ggttatgcgctgccgccgaaggaacgctgcaaaaccaccattaacctggtgccggaaacg
gaagtgctgaacatcctcgaaggggacgatgcagaaaccaacgcgttgcgtgctcggcat
cgttgccagaaatgcggcacggcgatggacagctacctgatcgataaccagcgcaagctg
cacgtctgcggtaacaacccggcgtgtgacggctatgaaatcgaagagggcgaattccgc
ctgaaagggtatgacggcccggtagttgagtgcgacaaatgtggttccgaaatgcacctg
aaaatggggcgcttcggtaagtacatgggttgcaccaacgagacgtgcaaaaacacccgt
aaaatcctgcgtaacggcgatgttgcgccgccgaaggaagatccggttccgttaccggaa
ctgccatgcgaaaagtcagacgcttactttgttctgcgcgacggtgctgccggcgtgttc
ctggcggccaacaccttccctaaatcgcgcgaaactcgtgcgccgctggtagaagaactg
gcccgtttcaaggatcgtctgccggaaaaactgcgttacctggcggatgcgccggtagcg
gatggcgaaggcaacaaaacgatggtgcgcttcagccgtaaaaccaaacagcagtatgtc
tcttcagagaaagacggtaaggccacaggttggtccgctttctacgtggacggcaaatgg
gttgaaggcaaaaagtaa
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