Serratia sp. AS13: SerAS13_2872
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Entry
SerAS13_2872 CDS
T02012
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
sra
Serratia sp. AS13
Pathway
sra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SerAS13_2872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sra03400
]
SerAS13_2872
DNA repair and recombination proteins [BR:
sra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SerAS13_2872
RecFOR pathway proteins
SerAS13_2872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
HHH_8
Transposase_20
HTH_78
Motif
Other DBs
NCBI-ProteinID:
AEG28647
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Position
complement(3056963..3057577)
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AA seq
204 aa
AA seq
DB search
MIGRLRGYILEKQPPLVLLEANGVGYEVHMPMTCFYELPDLGQEAIVFTQFVVREDAQLL
YGFNDKQERALFRELVKVNGVGPKLALAILSGMSAQQFVSAVEREEITTLVKLPGVGKKT
AERLVVEMKDRFKGLNGDLFNNSSEITLPATATQAAELDAEAEAASALVALGYKPQEASR
MVSKIAKPGADCETLIRDALRAAL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgataggtcgtctcagaggatatattctggaaaagcagccgccgctggtgttactggag
gcaaacggcgtgggttatgaagtgcatatgcccatgacctgcttttatgagctgccggat
ctggggcaagaagccatcgtgtttacccagtttgtggtgcgcgaagacgcgcagctgctg
tacggtttcaacgataaacaagagcgcgcactgttccgtgagttggttaaagtgaacggt
gtgggaccgaaactggcgctggctatcctgtccgggatgtccgcacagcagtttgtcagc
gcggtagagcgtgaagagatcaccacattggtgaaattgccgggcgtgggcaagaaaacc
gctgagcgcctggtggtcgaaatgaaagaccgctttaaagggcttaatggcgatctgttc
aataacagcagcgaaatcacgctgcccgctacggcaacgcaggcggccgagctggatgct
gaagcagaagccgcttctgcgctggtggcattaggctataaaccgcaggaagccagccgc
atggtcagcaaaatcgccaaaccgggcgccgattgcgaaaccctgatccgcgacgcgctg
cgcgccgccctgtaa
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