Serratia sp. AS13: SerAS13_3396
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Entry
SerAS13_3396 CDS
T02012
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
sra
Serratia sp. AS13
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sra03400
]
SerAS13_3396
DNA repair and recombination proteins [BR:
sra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
SerAS13_3396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
AAA_16
AAA_30
zf-tcix
Zn_ribbon_3
Zn_Ribbon_1
AAA_22
SLFN-g3_helicase
AAA
Motif
Other DBs
NCBI-ProteinID:
AEG29163
UniProt:
A0A7U4DXS1
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All DBs
Position
3621954..3623711
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AA seq
585 aa
AA seq
DB search
MAFTLRPYQLEAVEATIKHFRRHSQPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKDSAGKVVFGSVQSVARNLPLFDGAFSLLIIDECH
RISDDDDSQYQQIIQHLQKSNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDAGSLFRD
CIYELPLRYMIKNGYLVPPERLDMPIVQYDFSRLEARSNGLFSEIDLNRELKQQNRITPH
IISQIVEYAETRKGVMIFASTVEHAREIHGLLPAGEAALVSAETPAAERDALIEAFKQQR
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHSDSQPVQVFCPGCGFANLFWGKCTENGDIIEHYGRRCQGWLEDDDG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKEALKLKDALVLRCGGME
LQSGRDEKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFSWQTA
ADVLAQQALLRHPDFVVARKRGQFWQVREKVFDYQGRFRRANELY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactctacgcccctaccaactggaagcggtcgaagccaccatcaaacatttc
cgccggcattcacaaccggcgctgattgtgctgccgaccggtgcaggcaaaagcctggtg
atcgccgaactggcgaagcgcgcacgcggccgggtattggtgctggcccacgtgaaagag
ctggtagcgcaaaatcacgccaaatactgcgcctatggcctggaggcggatatctttgcc
gccgggctgcagcaaaaagacagcgccggcaaagtggtgttcggcagcgtacagtccgtg
gcgcgtaatctgccgttgttcgacggtgcgttttccctgctgattatcgacgagtgccac
cgcatcagcgatgacgacgacagccagtaccagcaaattattcagcacctgcaaaaatcc
aatccgcaactgcggctgttggggctgaccgccacgccttaccggctgggtaaaggctgg
atttatcagtatcactaccacggttttacccgcggcgatgccggcagcctgtttcgcgac
tgcatttatgaactgccgctgcgctacatgatcaagaacggctatctggtgccgccggaa
cggctcgacatgccgattgtacagtacgatttcagccgcctggaggccagaagcaacggc
ctgttcagtgagatagacctcaaccgcgagctgaaacagcaaaatcgcatcacgccgcat
atcatcagccagatcgtcgaatatgccgaaacgcgcaaaggggtgatgattttcgcctcc
accgttgagcatgctcgtgagatccacggcctgctgccggccggtgaggccgcgctggtc
agcgccgaaacgccggccgccgagcgggatgcgttgattgaggcgttcaaacaacagcgg
ctgcgctatctggtcaacgtagcggtgttgaccaccggctttgatgcaccgcatgtcgat
ctgatcgccattctgcgccccaccgaatccgtcagcctttatcagcaaatcgtcggccgc
gggctgcggctggctcccggcaaagaggattgcctgatcctcgactacgccggcaatccg
catgacctgtttacgccggaggtgggcgtcagcaaaccgcacagcgacagccagccggta
caagtattttgccccggctgcggcttcgccaacctgttctggggaaaatgcaccgagaat
ggcgacatcatcgagcattacggccgccgctgccaaggctggctggaagacgatgatggc
catcgcgaacagtgcgactaccgctttcgtttcaagagttgcccacactgtggcgcagaa
aacgacattgctgcgcgccgctgccaccagtgccaggaagtgctggtcgatcccgatgac
atgctgaaagaggcgctgaaactgaaggacgcattggttctgcgctgcggcggtatggag
ctgcaaagcgggcgcgatgaaaaaggcgaatggctgaaggccacctattacgatgaagac
ggtaccagcaccagcgagcgcttccgcctgcaaacgccggcgcagcgcaaagccttcgag
atgctgtttctgcgcccgcatcaacgcgcgccgggggtgccgttcagttggcaaaccgcc
gccgacgtgctggcccagcaggcactgttgcgtcatccggattttgtcgtggcgcgcaaa
cgtgggcaattctggcaggtgcgagaaaaagtgttcgattatcaaggccgcttccgccgg
gccaacgagctgtattga
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