Serratia sp. AS13: SerAS13_3571
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Entry
SerAS13_3571 CDS
T02012
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sra
Serratia sp. AS13
Pathway
sra00071
Fatty acid degradation
sra00280
Valine, leucine and isoleucine degradation
sra00310
Lysine degradation
sra00362
Benzoate degradation
sra00380
Tryptophan metabolism
sra00410
beta-Alanine metabolism
sra00640
Propanoate metabolism
sra00650
Butanoate metabolism
sra00907
Pinene, camphor and geraniol degradation
sra00930
Caprolactam degradation
sra01100
Metabolic pathways
sra01110
Biosynthesis of secondary metabolites
sra01120
Microbial metabolism in diverse environments
sra01200
Carbon metabolism
sra01212
Fatty acid metabolism
Module
sra_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SerAS13_3571
00650 Butanoate metabolism
SerAS13_3571
09103 Lipid metabolism
00071 Fatty acid degradation
SerAS13_3571
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SerAS13_3571
00310 Lysine degradation
SerAS13_3571
00380 Tryptophan metabolism
SerAS13_3571
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SerAS13_3571
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SerAS13_3571
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SerAS13_3571
00930 Caprolactam degradation
SerAS13_3571
Enzymes [BR:
sra01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SerAS13_3571
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SerAS13_3571
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SerAS13_3571
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AEG29337
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All DBs
Position
complement(3805247..3807412)
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AA seq
721 aa
AA seq
DB search
MSFENALHEQRAKPSAFQLTLRPDNIGVITIDVPGDKVNTLKAEFVEQVNDVLIRAQQHT
ALEGLVIISGKPDSFIAGADITMIAACTSAKEAETLAKKGQSTLAQIAAFPVPVVAAIHG
ACLGGGLELALACHGRICSLDDKTALGLPEVQLGLLPGSGGTQRLPRLIGASKALDMMLT
GKHIRARQALRMGLVDDAVPQAILLQTAIERVKQGWQSRRELPWQERLLNGPLGKSLLFS
IVRKKTLEKTHGNYPAAEKIIQVVRTGLDSGSTSGYEAEARAFGELAMTPQSAALRSLFF
ASTALKKERGGNAQPHALHRVGILGGGLMGGGIACVTATRGGLPVRIKDVNETGINHALK
YSWDVLGKRVRSKRMRPAERQKQMMLISGSTDYTGFERVDIVVEAVFEDLALKQNMVAEI
ERHAAPHTIFASNTSSLPIGQIAAKAQRPQQVIGLHYFSPVDKMPLVEVIPHATTSEETI
ATTVALAHKQGKTAIVVADRAGFYVNRILAPYINEAARCLLEGEPIESLDKALVNFGFPV
GPITLLDEVGIDVGTKIIPVLVEQLGPRFAAPAAFDAVLKDGRKGRKNARGFYLYPSEGQ
QRQRGKRADTSVYLLLGITPKSHLQPAVIAQRCVMMMLNEAARCLDEGVIRSARDGDIGA
VFGIGFPPFLGGPFRYMDELGAEKVVKTLQYLQQQYGENFAPCERLQRMAQQGERFYPQG
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgaaaacgcattgcatgaacagcgggccaaaccctcggcttttcaactgacg
ctgcgcccggacaacatcggcgtgattaccatcgacgttccgggtgacaaggtcaatacg
ctgaaagccgagttcgtcgagcaggtgaatgacgtcctgatccgcgcgcaacagcatact
gcgctggaagggctggtgattatttccggcaagcccgattcgtttattgccggggcggac
atcaccatgattgccgcctgcaccagtgccaaagaggccgaaacgctggcgaagaaaggg
caaagcacgctggcgcagattgctgctttcccggtgccggtggtggcggctattcacggc
gcttgcctggggggcgggctggagctggctctggcctgccatggtcgcatctgttcgctg
gatgacaaaaccgctctcggcctgccggaagttcagcttggtctgctgccaggctccggc
ggtactcagcgattgccgcgcttgatcggcgccagcaaggcgctggacatgatgctgacc
ggcaagcatatccgtgcgcgtcaggcgctgcggatgggattggtggacgatgcggtgccg
caggcgattttgttgcagaccgccattgagcgggtcaagcagggctggcagagccgacgt
gaactgccgtggcaggaacgcttgctcaacggtcctctggggaaaagcctgttgttcagc
attgtgcgcaaaaaaacgctggagaaaacccacggcaactatccggcagcggaaaaaatc
attcaggtggtgcgtaccggcctggacagcggcagtaccagcggttatgaagccgaagcg
cgggccttcggcgaactggccatgacgccgcagtcggcggcgttgcgcagcctgttcttt
gcctctaccgccttgaagaaagagcgcggcggcaatgcgcaaccccatgcgctgcaccgc
gtcggcattctgggcggtggcctgatgggcggcggaattgcctgcgtgaccgccacgcgc
ggtggcctgccggtgcgaattaaagatgttaatgaaaccggcatcaaccatgcgctgaaa
tacagctgggatgtgcttggcaagcgggtacgcagcaaacgtatgcgtccggcggaacgg
caaaaacagatgatgctgatctccggctcgaccgattacaccggctttgagcgggtggat
atcgtggtggaagcggtgtttgaggatctggccctgaagcagaacatggtggccgagatt
gaacggcacgccgcgccgcataccattttcgcctccaatacctcgtcgttgccgattggc
cagattgccgccaaagcgcagcggccgcagcaggtgatcggcctgcattatttcagcccg
gtcgacaaaatgccgctggtagaggtgatcccccatgccaccaccagtgaggaaaccatt
gccaccaccgtggcgctggcgcacaaacagggcaagacggccattgtggtggccgatcgc
gccggtttctacgtcaaccgcattctggctccttatataaatgaagcggcgcgttgtttg
ctggaaggcgaaccgatcgaatcgctggacaaggcgctggtgaatttcggcttcccggtg
gggccgattaccttgcttgatgaagtgggcattgatgtgggcaccaagattatcccggtg
ttggtggaacagcttggtccgcgtttcgccgcgccggccgccttcgatgcggtactgaaa
gacgggcgcaaagggcgtaaaaatgcccggggtttctacctgtatccgagcgaaggccag
caacgtcagcggggcaagcgcgccgatacctcggtatatcttctgctgggcatcacaccg
aagtcgcatttgcagccggcggtcatcgcccagcgctgcgtgatgatgatgttgaatgaa
gcggctcgttgtctggacgaaggcgtgattcgcagcgctcgtgatggggatatcggcgcg
gtattcggtatcggttttccgccgttcctcggggggccgttccgttatatggacgagctc
ggtgctgagaaggtggttaaaacgctgcaatacctgcagcagcaatacggcgaaaacttt
gccccctgcgaacgcttgcagcgcatggcgcagcagggcgaacgcttttatccgcaaggg
gagtga
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