Serratia sp. AS13: SerAS13_3859
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Entry
SerAS13_3859 CDS
T02012
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sra
Serratia sp. AS13
Pathway
sra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SerAS13_3859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sra03400
]
SerAS13_3859
DNA repair and recombination proteins [BR:
sra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SerAS13_3859
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SerAS13_3859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AEG29618
LinkDB
All DBs
Position
complement(4131086..4131817)
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AA seq
243 aa
AA seq
DB search
MDGWERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRW
GGRGEVKTLRNAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQAL
AAEDISPEQALRQFELALLNHLGYGLDFLHCAGSGQPVDDGMTYRYREEKGFIASLVVDH
YSFTGRELRALAERQFPDVQTLRAAKRFTRMALKPYLGGKPLKSRELFRQFVRKQPDTPV
DDA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggacggctgggagcgcgctttcgtcctgcatgggcgaccgtacagtgaaaccagcctg
atgctggacatgttcacggaaggccatgggcgggtgcgcttgctggcaaaaggcgcgcgc
agccgccgctccaatctaaaggggtgtctgcaaccctttactcccctgttagtgcgctgg
ggcggccgtggcgaagtgaaaacgctgcgtaacgccgaagcggtttccctcggtttaccc
cttagcggcatgatgctgtacagcggcctgtacgtgaacgaactgctgtcgcgggtgctg
gagcaggaagccaactactcggtattattcttcgattacctgcaatgtttgcaggcgctg
gcggcggaagacatttccccggagcaggcgctgcgccagttcgaattggcattgctgaat
cacctgggctatggcctcgatttcctgcactgcgccggcagcggccagccggtggatgac
ggtatgacctaccgttaccgcgaggaaaagggctttatcgccagcctggtggtggaccat
tacagctttaccggccgcgagctgcgtgcgctggcagagcgtcagttccccgatgtgcaa
accttgcgtgccgccaagcgcttcacccgcatggcgctaaaaccctatctgggcggcaaa
ccgctgaagagccgcgaactgtttcgtcagttcgttcgcaagcagccggatacgccggtc
gacgacgcctga
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