Serratia sp. AS13: SerAS13_4253
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Entry
SerAS13_4253 CDS
T02012
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sra
Serratia sp. AS13
Pathway
sra00330
Arginine and proline metabolism
sra00480
Glutathione metabolism
sra01100
Metabolic pathways
sra01110
Biosynthesis of secondary metabolites
sra04148
Efferocytosis
Module
sra_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SerAS13_4253
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SerAS13_4253
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SerAS13_4253
Enzymes [BR:
sra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SerAS13_4253
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Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AEG30008
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Position
complement(4548887..4551049)
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AA seq
720 aa
AA seq
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MKELKIATSASLVATIETLRQIVRIEQTDYTDVAAVVVSVDDVNAGILAQLKATGFEIPT
FVAVEGDEHLSPDYLPFITGVFALAGASKAFYMAQLEAAADAYEQALLPPFFKTLKTYVE
MENSTFACPGHQGGEFFRKHPAGRKFFEFYGETLFRSDMCNADVKLGDLLIHEGSAKDAQ
KHAARVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDSRCFDERYLREQIREVAPEKANAARPFRLAIIQLGTYDGTIYNA
RQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDELDPGIFVTQSVHKQQAGF
SQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGAAGRRM
WMDCVKLGIETRKQLLERCSQLRPFIPLQVAGKDWQDYDTDLIANDARFFNFVPGETWHG
FEGYAQDQYLVDPCKLLLTTPGIDAATGQYTEFGVPATILANFLRENGIVPEKCDLNSIL
FLLTPAENPAKMEHLVDMLVRFERYVEEDAPLSEVLPTVYRKNEQRYRGYTLRQLCQEMH
DLYVSFDVKQLQKEMFRQNHFPQVVMNPQDANVEFIRDNVELVPIGQAEGRIAAEGALPY
PPGVLCVVPGEVWGGAVQRYFLALEDGINRLPGFSPELQGVYIEKKDHGWKRIFGYMIKQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaaatagcaacaagcgccagcctggtcgccacgattgaaacgctgcgc
cagattgtccgcattgaacagacggactataccgatgtggccgcggtggtcgtgtcggtt
gatgacgttaacgccggtattttggcgcagctgaaagccaccggattcgagatcccaacg
tttgttgctgttgaaggggatgaacatctctccccggactacctgccgtttattaccggc
gtttttgccctggccggcgccagcaaggcgttctatatggcgcagctggaagccgctgcg
gacgcctacgagcaggcgctgctgccgccgtttttcaaaacgctgaagacttacgtggag
atggaaaactccaccttcgcctgcccggggcatcagggcggggagtttttccgcaagcac
ccggccggccggaagtttttcgaattctacggtgaaacgcttttccgttccgacatgtgc
aacgccgacgtcaagttgggcgacctgctgatccacgaaggctcggccaaggatgcgcaa
aagcatgcggcgcgggtcttcaacgccgataaaacctatttcgtgctcaacggcacttcg
gcggccaacaaggtggtgaccaatgcgctgctgacccgcggcgatctggtgctgttcgat
cgcaacaaccataaatccaaccaccacggcgcgctgatccaggccggggcgacgccggtg
tatctggaaaccgcgcgcaatccgtttggttttatcggcggcatcgattcacgttgcttt
gacgagcgctatctgcgtgagcaaattcgtgaggtggcgccggagaaggccaatgcggcg
cggccgttccgcctggcgatcattcagctcggtacttacgatggcactatctataatgcg
cgccaggtgatcgacaccatcggccatctgtgcgattacatcctgtttgactccgcctgg
gtgggttacgaaggctttatcccgatgctgaaagagtgctcgccgctgttgctggagctg
gatgaactcgatccgggtattttcgttacccagtcggtgcataagcagcaggcaggtttc
tcgcagacctcacagatccacaagaaagacgatcatatcaagggccagaagcgccactgt
aaccacaagcaccttaataacgctttcatgttgcatgcctcgaccagcccgttctacccg
ctgttcgctgcgcttgacgttaacgccaagatgcatgccggggccgccggccgtcgcatg
tggatggactgcgtaaagctcggtatcgagacgcgcaagcaactgctggaacgctgttcc
cagctccggccgtttattccgttgcaggtagcgggcaaggactggcaggattacgatact
gacctgatcgccaacgacgcccgtttcttcaattttgtgccgggcgagacgtggcacggt
ttcgaaggttatgcgcaggaccagtatctggtcgatccgtgcaagctgctgctgaccacg
ccgggcatcgacgcggccaccggccaatacaccgagttcggcgtgccggccaccattctg
gccaacttcctgcgtgagaacggcatagtgccggagaaatgcgatcttaattcgatcctg
ttcctgctgaccccggcggaaaatccggccaagatggagcacctggtcgatatgctggtg
cggttcgaacgctacgtggaagaagacgcgccgctgagcgaagtgttgccgacggtgtac
cgcaagaacgagcagcgctaccgcggctataccctccgccagctgtgtcaggaaatgcac
gatctgtacgtcagcttcgacgttaagcagctgcaaaaagagatgttccgccagaaccat
ttcccgcaggtggtgatgaacccgcaggacgccaacgtggagtttattcgcgacaacgtc
gagctggtgccgatcggccaggctgaagggcgcattgcggcggaaggcgcgttgccgtac
ccgccgggcgtgctgtgcgtggtgccgggggaagtgtggggcggagcggtgcagcgttac
ttcctggcgctggaagacggcatcaaccgtctgccaggcttctcgccggagctgcagggc
gtgtatatcgagaaaaaagatcacggctggaaacgcattttcggctatatgatcaagcag
taa
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