Serratia sp. AS13: SerAS13_4886
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Entry
SerAS13_4886 CDS
T02012
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sra
Serratia sp. AS13
Pathway
sra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SerAS13_4886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sra03400
]
SerAS13_4886
Enzymes [BR:
sra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SerAS13_4886
DNA repair and recombination proteins [BR:
sra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SerAS13_4886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_30
zinc-ribbons_6
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEG30637
UniProt:
A0A7U4DZ65
LinkDB
All DBs
Position
5289994..5292189
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AA seq
731 aa
AA seq
DB search
MPVVHVALPVPLARTFDYLLPQGLQPVAGARVCVPWGKQRAIGIVTGSSDTSELPLDKLK
PIDSIIDNASLFSPSLWRILRWASDYYHYPIGEVLFHALPILLRQGKPAEAAPLWQWFAT
EQGRATPPESLKRAPKQQQALAALLQRPVYRHQVSELELTESALQALRAKGLIDLRAQAL
ATQDWRPGFTVLGERLRLNTEQATAVGAIRSEDDQFAAWLLAGVTGSGKTEVYLSVLENI
LAMGKQALVLVPEIGLTPQTIARFRERFNAPVDVLHSGLNDSERLAVWLRARSGEAAIVI
GTRSALFTPFSRLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAREENIPMVMGSATPAL
ETLHNVQLGKYRQLKLTQRAGNAKPAAQHLIDLKGLPLKVGLSQPLLKSMQHHLKAGNQV
MLFLNRRGYAPALLCHECGWIAECQRCDHYYTFHQNQRQLRCHHCDSQRPVPHQCPQCGS
THLVSVGVGTEQLENELAPLFPETPITRIDRDTTSRKGSLEQHLADIHRGGSRILIGTQM
LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVLLQTHHP
EHPLLQILLQQGYEAFSKQTLAERNSVFLPPYTSHIIVRSEDHDNQQAPLFLQQLRNLLE
ASPLKDDSLWVMGPVPALQSKRGGRFRWQLLLQHPSRRVLQQLMKSSLPLIGTLPQARKV
KWTLDVDPIDS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgtacacgttgctttaccggttcccctcgcccgcaccttcgactatctgctg
ccgcaaggcctgcagccggtcgccggcgcgcgcgtttgtgtaccctggggtaagcaacgg
gcgatcggcatcgtcaccggcagcagcgacaccagcgaactgccgctggataagcttaag
cccatcgacagtatcatcgacaacgcctccctgttctcccccagcctgtggcgcattctt
cgctgggccagcgactattatcattacccgatcggtgaagtgttgttccatgcgctgccg
atcctgctaagacagggaaagccggcggaagctgcgccgctgtggcaatggttcgccact
gaacagggccgcgccacgccgccggaaagcctgaaacgcgcccccaaacaacagcaggcg
ctggctgcgctgctgcagcgcccggtgtatcgccaccaggtcagcgaacttgaactgacc
gagagcgccctgcaggcattgcgcgccaaagggctgatcgacttacgggctcaggcattg
gcgacgcaggactggcgaccgggttttacagtgctcggcgaacggctgcggctgaatacc
gaacaggccaccgccgtgggtgcgatccgcagcgaagacgatcagtttgccgcctggctg
ctggccggggtcaccggctccggcaagacagaggtctatctcagcgtgctggaaaacatt
ctggccatgggcaaacaggcgctggtgctggtgccggaaatcggcctgacgccgcaaacc
atcgctcgctttcgcgaacgcttcaatgcgccggtagacgtactgcactccggcctcaac
gacagcgaacggctggcggtatggctgcgcgcccgcagcggcgaggcggcgatcgtcatc
ggtacccgctcggcgctgtttaccccgttctcacgcctgggcgtgatcattatcgacgaa
gagcacgacagctcctataaacagcaagaaggctggcgctaccacgcacgcgatctggcg
gtgttccgcgcccgggaagagaacatcccgatggtcatgggttccgccacgccggcgctg
gaaacgctgcacaacgtgcaactgggtaaataccgtcagctcaaactcacccagcgcgcg
ggcaacgccaaaccggcggcgcagcacctgatcgacctgaaaggcctgccgctgaaggtg
ggtttgtcgcagccgctgctgaaaagcatgcagcaccatctgaaagccggtaatcaggtg
atgttattccttaaccgccgcggctatgcgcccgcgttgttgtgccacgaatgcggctgg
atcgccgaatgccaacgctgcgatcattactacaccttccatcagaaccagcgccaactg
cgctgccaccactgcgacagccagcgaccggtaccgcaccagtgtccgcaatgcggttca
acgcacctggtctcggtcggcgtcggtaccgagcaattggaaaacgaactggcgccgctg
ttcccggaaacgccgattacccgtattgaccgagacaccaccagccgcaagggctcgctt
gagcaacatctggcggatattcaccgtggtggctcacgcatattgatcggcacccaaatg
ttggcaaaaggtcaccatttcccggacgtgacgctggtcgccctgctggacgtcgacggc
gcgctgttttcggctgatttccgttccgctgaacgctttgctcaactgtatacccaggtc
tccggccgtgcaggccgcgccggcaaacagggtgaagtccttttgcagactcaccacccg
gaacacccgctgctgcaaattctgttgcagcagggctacgaggccttttccaaacagacg
ctggcggaacgcaacagcgtcttcctgccaccctacaccagccatatcatcgtgcgttcg
gaagatcacgataaccaacaggcgccgctgttcctgcagcagctgcgcaatctgctggag
gccagcccgctgaaagacgactcgttgtgggtcatggggcccgtcccggcattgcagtca
aaacgcggcggccgcttccgttggcaactgctgttgcagcacccttcgcgacgcgtgctg
caacagttgatgaaaagctcgttgccgttgatcggcacactgccacaggcacgtaaggtg
aaatggacgctggacgtcgatccgatagatagctga
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