KEGG   Sphingomonas radiodurans: LLW23_00090
Entry
LLW23_00090       CDS       T08717                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
srad  Sphingomonas radiodurans
Pathway
srad02020  Two-component system
Brite
KEGG Orthology (KO) [BR:srad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LLW23_00090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:srad02022]
    LLW23_00090
Two-component system [BR:srad02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   LLW23_00090
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 VpsR AAA_16 AAA_22 AAA_7
Other DBs
NCBI-ProteinID: WBH16575
LinkDB
Position
19180..20550
AA seq 456 aa
MALDILVVDDELDIRELVSGVLEDEGYETRTAADSDSALAAIAERRPSLVLLDVWLQGSR
LDGLELLAEIKRRDPSISVLVISGHGNLDTAVAAIRQGAADFIEKPFQAERLLLMVERAT
ETERLRREVASLRRFAGRDTDLTGNSSAINAVRATLKRVAGTGSRVMIVGPAGVGKEVAA
RLLHGWSQRASSPFTVVSAANMTPERVEEELFGVEEGGDLVRAGLLEQAHGGTLFLDDIA
DMPITTQGRILRVLTDQSFTRVGGTRIVRVDVRVVSATARDLTHEIAEGRFREDLYYRLN
VVPVLIPSLSERREDIPALVDHFVAHYAAERRVPAPEVATDAMVALQSYDWPGNVRQLRN
VVERTIILAPGDRIGRIDIDLLPIEVLGEQQGGGNTNAIMGSPLREARESFEREYLKVQI
RRFSGNISRTATFIGMERSALHRKLKLLGITDTRDE
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggcgctagacatcctcgtcgttgacgacgaactcgacatccgcgaactggtttccggc
gtgctggaagacgaaggctacgagacgcgcaccgccgccgatagcgattcggcgctcgcg
gcaattgccgagcgccgaccaagcctcgtactgctcgatgtctggctgcagggctcgcgg
ctagatgggcttgagctgcttgccgagatcaagcggcgcgatccgtcaatctcggtgctc
gtcatctcagggcacggcaacctcgacactgcggttgccgcgatccgtcagggcgccgct
gacttcatcgaaaagccgttccaagccgaacgcctcctgctgatggtcgagcgcgcgacc
gagaccgagcggctgcggcgcgaagtcgcgagcctgcggcgatttgccggccgcgacacc
gacctgaccggcaattccagcgcgatcaacgccgtacgtgcgacattgaagcgcgttgca
ggaacgggcagccgtgtcatgatcgtcggccccgccggagtcggcaaggaagttgccgca
cgattgcttcacggctggagccagcgagcctccagccctttcaccgtcgtaagcgcggcg
aacatgactcccgagcgcgtcgaggaggaactgttcggggtagaggagggcggtgacctc
gttcgcgccggcctgctcgaacaggcgcatggcggcacgctattcctcgacgacattgcg
gacatgccgatcaccacgcaggggcgcatcctgcgggttttaaccgaccagagctttacg
cgcgttggcggcacgcggatcgtacgagtcgatgtgcgcgtggtatcggccacagcgcgc
gatttgacgcacgagatcgccgagggccgtttccgcgaggatctctactaccgtctcaat
gtggtgcccgtcctgatcccgtcactgtccgaacggcgcgaagatattccggccctcgtc
gatcatttcgtcgcgcattacgccgccgagcgccgcgtacccgcgccggaagtcgcgacc
gatgctatggtggcgctgcaatcctatgactggccgggcaacgtccgccagttgcgcaac
gtggtcgagcgcacgatcatcctcgcgccgggcgatcggatcggccggatcgatatcgac
ctgctgccgatcgaagtgctcggcgagcagcagggcggcggcaacaccaacgccatcatg
ggctcccctttgcgcgaggcgcgcgagtcgttcgaacgcgaatatctcaaggtccagatc
cggcgcttctcgggcaacatttcacgtaccgctaccttcatcggcatggaaagatccgcc
cttcaccgcaaattgaagctgttggggatcaccgatacgcgcgacgaatga

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