Sphingomonas radiodurans: LLW23_00415
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Entry
LLW23_00415 CDS
T08717
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
srad
Sphingomonas radiodurans
Pathway
srad00550
Peptidoglycan biosynthesis
srad01100
Metabolic pathways
srad01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LLW23_00415 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LLW23_00415 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srad01011
]
LLW23_00415 (mrdA)
Enzymes [BR:
srad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LLW23_00415 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
srad01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LLW23_00415 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WBH16632
LinkDB
All DBs
Position
84574..86667
Genome browser
AA seq
697 aa
AA seq
DB search
MIRPTRIATEAQQGYTFSRRAWLLGAAQLGVGGVLVGRMAWLSIAENERYNLLSESNRVN
MTLIPPRRGWLVDRHGHPIADNRTDFRVDLIPDRIVDEERTLAALRQLLALTDEDLLRIR
ADLKRAAGFQPVKVAENVGWERFAAVQVRQPELPGVAPTRGFARNYPAGAAVAHLTGYVG
GATAEQFDVKRDPLLLTPGFKLGKDGLEKTLETELRGSPGAKRVEVTARGKLVAELATRP
DQPGATQRLTIDAGLQEYAARRLGTNSGSAVVFDCDTGEMLCMVSMPAYDPNSFSDGISH
LEWKMLSADDHVPLMNKVTQGLYPPGSTVKPMNGLALLEAGVDPDARVFCGGAMRVGSGT
FHCHKRRGHGSLDLRSAIALSCDIYFYEMVRRLGYDRVAPVARAVGLGEKYDLPFSTQRY
GTVPDSAWKQRKYNTKWTVADSLNASIGQGYVLANPLQLAVMAMRIGSGRMLKPSLLADR
IDRNAPPLPFSAENLQIVREGMWKVVNGGGTGGASRLAIPGVELAAKTGTAQVRRITMAE
RRSGVLGNAQLPFKLRDHALFVCFAPADKPRYAAAIVLEHNGHTVRNLDTPLIGRDIMTY
LFDKPRAMKSLEEVEPSWGGDIRTRMAAQEAAFRAAATAPPPAQAAATETDAPAPTSAPA
VERATDASNATQEATVSDIANGAGPASVGTTEPPFPQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcccgacacgcatcgcgaccgaggcgcagcagggatacactttctcgcgccgt
gcgtggctgctaggcgccgcgcagcttggtgtcggcggcgtgctcgtcgggcgcatggcg
tggctctcgatcgccgagaacgagcgctacaacctcctgagcgagagcaaccgcgtcaac
atgacgctgatcccgccgcgccgcggctggctcgtcgaccgtcacggccacccgatcgcc
gacaatcgcaccgactttcgcgtcgacctgatccccgatcgcatcgtcgacgaggaaagg
acgctcgctgcgctgcgtcagctgctcgcgctgaccgacgaggatctcctgcgcatccgc
gccgatctgaagcgcgctgccgggtttcagccggtgaaggtcgccgagaacgtcggctgg
gaacgcttcgccgccgtccaggtacgccagcccgagctcccaggcgtcgctccgacccgc
ggcttcgcgcgcaactatcccgccggcgctgcagtcgcccatctgaccggctatgtcggt
ggcgccacagccgaacaatttgacgtgaagcgcgatccgctgctcctcacgcccggcttc
aaactcggcaaggatgggcttgaaaagacgctggaaaccgagctgcgcggcagccccggc
gcgaaacgcgtcgaggtcactgcgcgcggcaagctcgtcgccgagctcgccacccgcccc
gatcagcccggcgccacccagcggctgacgatcgacgctgggctccaggagtatgccgcg
cgccggctcggcaccaactcgggctcggctgtcgtcttcgactgcgataccggcgagatg
ctctgcatggtctcgatgccggcctatgatcccaacagcttttcggatgggatcagccat
ctcgaatggaagatgctgtcggccgacgatcacgtgccgctgatgaacaaggtcacgcag
ggcctttatccccccggctccaccgtgaagccaatgaatggccttgcgctgctggaggct
ggggtcgatccggacgcgcgcgtcttctgcggcggcgcgatgcgcgtgggcagcggcacg
ttccactgccacaagcgtcgcggtcacgggtcgctcgatctgcgcagcgccatcgcgctc
agttgcgacatctatttctacgaaatggtccgtcgcctcggctacgatcgcgtcgccccg
gtcgcacgcgccgtcggcctcggcgagaaatatgatttgcccttctccacccagcgctac
ggcaccgtgcccgacagcgcgtggaagcagcgcaagtacaacaccaagtggaccgtcgcg
gattcgctcaacgcctcgatcggtcagggctatgtcctcgccaacccgctccagctcgcg
gtgatggcgatgcggatcggctcgggtagaatgctcaagccgagcctgctggccgatcgg
atcgatcgcaacgcacccccactgccgttcagtgccgagaacctccagatcgtgcgcgag
ggcatgtggaaagtcgttaacggcggcggcaccggcggcgcctcgcgcctcgctattccc
ggcgtcgagctcgccgccaagacgggcaccgctcaggtccgccgcatcaccatggcggaa
cgccgctcgggcgtgctcggcaatgcgcaattgccgttcaagctacgcgatcacgcgctg
ttcgtctgcttcgctccggcggacaagccacgctatgctgccgcgatcgtgctcgaacat
aacggccacaccgtccgcaacctcgataccccgctgatcggccgcgacatcatgacgtac
ctgttcgacaagccccgcgcgatgaagtcgctcgaggaggtcgagcccagttggggcggc
gacatccgcacgcgcatggccgcgcaggaagccgccttccgcgctgccgccaccgccccg
ccccctgcgcaagccgccgccaccgaaaccgacgcccccgcgccgaccagcgctcccgcc
gtcgaacgggccaccgacgcctcgaacgcgacgcaggaggcgaccgtcagcgacatcgcc
aacggtgctggcccggcgagcgtcggcaccaccgagccgcctttcccgcaatga
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