Sphingomonas radiodurans: LLW23_00785
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Entry
LLW23_00785 CDS
T08717
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein TssI/VgrG
Organism
srad
Sphingomonas radiodurans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
Gp5_trimer_C
Phage_base_V
Motif
Other DBs
NCBI-ProteinID:
WBH16694
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Position
complement(162146..164032)
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AA seq
628 aa
AA seq
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MAHLLNLRELAGEPVESYALLGFEGREAISEPFEYRLELIATTEPDLSAWIGKLAEFDVS
PDHGSQRVFAGRIYGARWAESGDERRIHIQIRPSYHALSYARATHFVQDKNTLEIFDAMT
ADVTGLVKAVSVSPPPPKRGYAVRYDETELDFLARMLAQDGIMYFFAYERGAGSYRHKMI
VTNKPADYIDLPGGAAEFLPNSDGASIDTLERRYRAAPRKHGHVGFNVNKLDTPFPQPGT
AADSWGAVYSHAYETTSAEAVAKGDVKTRQEASDEHVAQSADFVEGTSTEPGFQAGGRVE
VIGGGKVSPKRVVLTSVVHSAYDPWMLEGEIPPHYANRFTAIDATKTFRPSVELAARRAP
GPILGTIALKGAAEGEAKIDDQWRVPVAIANARDYSGNGLPEIVWLPVQQQWAHSTHGAQ
FFPRIGSRVIIDFLYGNPDLPFIAGSVFTPSQKYPFDPTSTPTQSGWRSITDKNGSIVQE
FRFEDKPGEEEVYLYTGRDYRRVIDNDDWGTVKRDQTLIVERDQKLNVTKDRTVKIEGLQ
KTDITKTRTMTVLQESLHESKKEIELKVGPSSIKLTMQGIEIKAPTIKITSDATMDLKAG
AMATFKAALIQETSDGPMILKGAIVMIN
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcttctcaaccttcgtgaactcgccggcgagccggtcgagagttatgcgttg
ctcgggttcgaggggcgcgaggctatttccgagccgttcgagtaccggctcgaactgatt
gcgacgaccgagcccgacctgtccgcctggatcggaaagctcgcggagttcgatgtctcg
ccggatcacggcagccagcgcgtgttcgccggccggatctatggcgcgcgctgggcggag
agcggcgacgagcggcggattcacatccagatccgcccgtcatatcatgcgctatcctat
gcgcgggcgacacacttcgttcaggacaagaacacgctcgaaatattcgacgcgatgact
gccgacgtgaccggattggtcaaggcggtgagcgtcagtccgccgccgcccaagcgcggc
tatgcggtgcgttacgatgagaccgagctcgattttctcgctcggatgctggcgcaagac
ggcatcatgtatttcttcgcctatgagcgcggcgcaggtagctatcgtcacaagatgatc
gtgacaaacaagccggcggattacatcgacctgcccggcggggcggcggagttcctgccg
aacagcgacggcgcctcgatcgatacgctggaacgccgctatcgcgctgcgccacgcaag
cacgggcatgtcgggttcaacgtcaacaagctcgacacgccgtttccgcagccgggaacg
gcggcggacagctggggggcggtgtacagccacgcttacgaaacgacgagcgcagaagct
gtcgccaagggagacgttaagacacggcaggaagcgagcgacgaacatgtcgcgcaatcc
gccgatttcgtcgaaggcacgtcgaccgagccgggcttccaggctggcggccgcgtcgaa
gtgatcggtggcggcaaggtctcacccaagcgggtcgtgctcacgtcggtggtgcacagc
gcttacgatccgtggatgctggaaggcgagattccgccgcattacgcgaatcgttttacg
gcaatcgacgccaccaagaccttccgcccctcggtcgagctcgccgcccggcgcgcgccc
gggccgatcctgggcaccatcgcgcttaagggcgcggcagagggcgaagcgaagatcgat
gatcagtggcgtgtgccggtcgcgatcgccaatgcacgcgattattcgggcaacggcttg
ccggagatcgtctggttgccggtgcagcagcaatgggcgcacagcacacacggcgcgcaa
ttcttcccgcgcattgggtcgcgggtgatcatcgatttcctctacggcaatccggatctc
ccgttcatcgcaggatcggtattcactccgtcgcagaagtatccgttcgatccgacatcg
acgccgacgcagagcggatggcggtcgattaccgataagaacggcagtatcgttcaggaa
ttccgcttcgaggacaagcctggcgaggaggaagtgtatctctacaccggtcgcgactat
cgccgcgtgatcgacaatgacgattggggcacggtcaagcgcgaccagacgctgatcgtg
gaacgtgatcagaagctcaatgtgacgaaggaccgtaccgtcaagatcgaggggctgcag
aagaccgacatcaccaagacccggacgatgacggtgctgcaggagagccttcacgaatcg
aagaaggaaatcgagctcaaggtcggcccgtcgagcatcaagctgacgatgcagggcatc
gagatcaaggcgccgacgatcaagatcacgtccgacgcgacgatggatctgaaggcaggt
gcgatggcgacgttcaaggcggcattgattcaggagacatccgacgggccgatgatcctg
aagggcgccatcgtcatgatcaattag
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integrated database retrieval system
