Sphingomonas radiodurans: LLW23_02115
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Entry
LLW23_02115 CDS
T08717
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srad
Sphingomonas radiodurans
Pathway
srad00061
Fatty acid biosynthesis
srad00071
Fatty acid degradation
srad01100
Metabolic pathways
srad01212
Fatty acid metabolism
srad02024
Quorum sensing
srad04146
Peroxisome
Module
srad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LLW23_02115
00071 Fatty acid degradation
LLW23_02115
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LLW23_02115
09145 Cellular community - prokaryotes
02024 Quorum sensing
LLW23_02115
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srad01004
]
LLW23_02115
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srad04147
]
LLW23_02115
Enzymes [BR:
srad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LLW23_02115
Lipid biosynthesis proteins [BR:
srad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LLW23_02115
Exosome [BR:
srad04147
]
Exosomal proteins
Exosomal proteins of breast milk
LLW23_02115
Exosomal proteins of breast cancer cells
LLW23_02115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
WBH16938
LinkDB
All DBs
Position
454375..456162
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AA seq
595 aa
AA seq
DB search
MRTLEHFPNLVTMFFTRARERGDAPFLWAKRDGAWQPISWAEAARQVASLASALKAQGLQ
PGDRVMLVSENRPEWCLSDLAIMAAGCVTVPTYITNTERDHAHVIENSGARAVIVSTQKL
ADVLLRAVLRTTHIETVVAIESLRPRPSGVRSCSWHALIEEHPTDAATVAAQATFTRADT
ACIIYTSGTGGAPRGVMQHHGAILHNVAGCANSISEDIGWDDEVFLSFLPLSHAYEHTGG
QFVPVGMGGQIYYAESLEKLAANMEETRPTIMFVVPRLFEVLRTRISKAIAKQGGITERL
LHAALDIGAKREAGTLRLIDRPKALIVDKVFKQRIAQKFGGRMKAMISGGAPLTPEVGVF
FQSLGVTFLQGYGQTESGPVISCNRPKAGVTMDGVGPPLADTEVRIAADGEILVRGELVM
HGYWRNPAETARVLQDGWLHTGDIGVFDAAGRLKITDRKKDLIINDKGDNVAPQKVEGML
TLQPEIMQAMIAGDRKPHMVAVIVPDPEWTQEFCAATGTKCDFAGLSENADYRAAIGRAV
ERTNKDLSVIERVRRFILADGPFTIENEQLTPSLKIRRHVLRQVYGERLDALYKG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgctcgaacattttccgaatctcgtcacgatgttcttcacgcgggcgcgagaa
cggggcgatgcgccgttcctgtgggcgaagcgcgatggcgcgtggcagccgatcagctgg
gccgaggcggcgcggcaagtggcgagccttgcctcagcgctgaaggcgcaagggctgcag
ccgggcgaccgcgtgatgctggtgagcgagaaccggcccgaatggtgccttagcgatctg
gcgatcatggctgctggctgcgtgacggtgccgacctatatcaccaacaccgagcgcgat
catgcgcatgtgatcgagaattcaggcgcgcgcgcggtaatcgtctcgacgcaaaagctg
gccgacgtgctgctgcgcgcagtgctgcgcacgacgcacatcgagacggtggtggcgatc
gagtcgctacgaccgcggccatcgggggtgcgtagctgcagctggcacgcgctgatcgag
gagcatccgaccgatgcagcgacggtcgcggcgcaggcgaccttcacccgcgccgatacc
gcctgcatcatctacacatctggcacgggcggcgcgccgcgcggcgtgatgcagcatcat
ggcgcgatcctgcacaatgtcgccggatgcgcgaacagcatttccgaggacatcggctgg
gacgacgaagtgttcctgtcgttcctgccgctcagccacgcctacgagcataccggcggg
cagttcgtgccggtcggcatgggcggtcagatctattatgcggagagtctcgagaagctc
gccgcgaacatggaggagacgcgaccgacgatcatgttcgtcgtgccacggctgttcgag
gtgctgcgcacgcggatcagcaaggcgatcgccaagcagggcgggatcaccgaacggctg
ttgcacgccgcgctcgatatcggggcgaagcgcgaggctggcacgctgcggctgatcgac
cggcctaaggcgcttatcgtcgacaaggtattcaagcaacggatcgcgcagaagttcggc
ggtcggatgaaggcgatgatctcgggcggcgcgccgttgacgcccgaggtgggggtgttc
ttccagtcgctcggggtcaccttcctgcaaggctatgggcagaccgaatcaggaccggtt
atctcgtgcaaccgccccaaggcgggggtgacgatggacggcgtcgggccgccgctggcc
gatactgaggtgcggatcgcggcggacggcgagatcctggtgcgcggcgaactcgtgatg
cacggctattggcgcaacccggccgaaaccgcgcgggtgctgcaggacggctggctgcac
accggcgacatcggcgtgttcgacgcggccgggcggctgaagatcactgatcgcaagaaa
gatctgatcatcaacgacaagggcgacaatgtcgcgccgcagaaggtggagggcatgctc
acgctgcagcccgagatcatgcaggcgatgatcgcgggggatcgcaagccgcatatggtt
gcggtgatcgtgcccgatccggagtggacgcaggagttctgcgccgcgaccggaaccaag
tgcgatttcgccgggctatcggagaatgccgactatcgtgctgcgatcgggcgcgcggtg
gagcggaccaacaaggatctgtcggtcatcgagcgggtgcggcggtttatcctcgccgat
ggcccgttcacgatcgagaacgagcaactgacaccaagcttgaagatccgccggcatgtg
ctgcggcaggtttatggcgagcggctggacgcgttgtacaaggggtga
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