Sphingomonas radiodurans: LLW23_02925
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Entry
LLW23_02925 CDS
T08717
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
srad
Sphingomonas radiodurans
Pathway
srad00500
Starch and sucrose metabolism
srad01100
Metabolic pathways
srad01110
Biosynthesis of secondary metabolites
Module
srad_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LLW23_02925 (glgX)
Enzymes [BR:
srad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
LLW23_02925 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
GHL5
Motif
Other DBs
NCBI-ProteinID:
WBH17090
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All DBs
Position
complement(610083..612185)
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AA seq
700 aa
AA seq
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MPSLADRLQPGSPYPLGATFDGLGINFAVFSANADAIELCLFDPAGKRELARLPLPECTD
EVWHGYLPDAEPGLLYGFRAHGAYDPEAGHRFNPHKLLLDPYARRLHGTIKWTDALHGYR
IGHRREDLSFDKRDSAPAMPKGVVVDDHWDWSRDRRPNTPWSDTVIYEAHTKGLTRLMEE
VPARERGTYAALGHPAVIRHLQRLGVTALELLPIHAFTQDRFLQEKGLRNYWGYNTLGFF
APEQAYMSSEHQDELRRAVHRLHNAGIEVILDVVYNHTCEGSEKGPTLSWRGLDNASYYR
LVADQPRYTINDTGTGNTLNMSKGRVIQMVADSLRYWATSFGIDGFRFDLGLTLGREATG
FDPGSAFFDVVRQDPVLGRLKLIAEPWDVGIGGYQLGNFPPGFAEWNDKYRDTVRRYWRG
DAGQRGELAARLSGSGDLFDRRARRPWASVNFIAAHDGFTLADTVMYEDRHNEANGEDNR
DGHDNNHSRNWGAEGPTDDPSINDARGRVMRSMMTTLLASLGTPMLVAGDEFGRTQQGNN
NAYCQDNAISWLDWKAAASPDGEALIDFTARLIALRKRYPVLHAATFLYGQETPGQGIND
IEWWDERGQSLSPEDWQNAEGRALLMRRAIRTAGDEVEAVSLLLNGGSDPVTFRLPPPGE
RRRVLIDSAKPDQAEIEIGDEYEVAPQGAVLLTWTSAWAA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
ttgccatcgctcgctgaccggctgcagccgggttcaccttatccgctcggcgccaccttt
gacggcctgggcatcaacttcgcggtcttctccgccaatgccgatgcgatcgagctgtgc
ctgttcgatcccgccggcaagcgtgagctcgcgcgcctgccgctgcccgaatgcactgac
gaagtctggcacggctatctccccgatgccgagccgggcctgctctacggcttccgcgcg
cacggcgcctacgatcccgaggccggccaccgtttcaacccgcacaagctgctgctcgat
ccctatgcccgccggctccacggcacgatcaaatggaccgacgcgctccacggctatcgc
atcggccaccgccgcgaggatctgtcgttcgacaagcgtgacagcgcgcctgcgatgccc
aagggggtcgtcgtcgacgatcactgggattggtcgcgcgatcgccgccccaacacgccc
tggtccgataccgtcatttatgaggcgcataccaagggcctgacgcggctgatggaggaa
gtgcccgcgcgcgaacgtggcacctatgccgcgcttggccaccccgcggtgatccgccat
ctccagcggctcggcgtcaccgcgctcgagctgttgccgatccacgccttcacgcaggat
cgctttctgcaggagaagggcctgcgcaattactggggctataacacgctcggcttcttc
gcccctgagcaggcctatatgtcgtccgagcatcaggacgagctgcgccgggcggtccac
cggctgcacaatgccgggatcgaggtgatcctcgacgtggtgtacaaccacacgtgcgag
ggctcggaaaagggcccgacgctgtcgtggcgcgggctcgacaatgccagctactaccgc
ctcgttgccgatcagccgcgctacacgatcaacgataccggcacgggcaacacgctcaac
atgagcaaggggcgcgtgatccagatggtcgctgattcactgcgctactgggcaaccagc
ttcggcatcgacggctttcgcttcgatctcggcctcacgctcggccgcgaggcgaccggc
ttcgatcccggcagcgccttcttcgatgtcgtccggcaggatccggtgctcggccggctc
aagttgatcgccgagccgtgggatgtcggcatcggcggctatcagctcggcaatttcccg
cccggctttgccgaatggaacgacaaatatcgcgatacggtgcggcgctactggcgcggc
gacgctggccagcgcggcgaactggccgcgcgcctgtcgggctcgggcgacctcttcgac
cgccgcgcccgccgcccctgggccagcgtcaacttcatcgccgcgcacgatggcttcacg
ctcgccgacacggtgatgtacgaagatcgccacaacgaggccaatggcgaggacaatcgc
gacgggcacgacaacaatcattcgcgcaactggggcgccgaaggcccgaccgacgatccc
tcgatcaacgacgcgcgcggccgcgtcatgcgatcgatgatgacgacgctgctcgcctcg
ctcggcacgccgatgctggtcgccggcgacgaattcggccgcacgcaacagggcaacaac
aacgcttattgccaggacaatgcgatcagctggctcgactggaaagccgcggcgagcccc
gacggcgaagcgctgatcgacttcaccgcgcgcctgatcgcccttcgcaagcgctacccg
gtgctccacgccgcgaccttcctctacggccaggaaacgccggggcagggcatcaacgac
atcgaatggtgggacgaacgcggccagtccttgagccccgaagattggcagaatgccgaa
ggccgcgcgctgctgatgcgccgcgcgatccgcacggcgggcgacgaggtcgaagccgtc
tcgctgctgctcaacggcggcagcgatccggtcaccttccgcctgcccccgccgggcgag
cgccgccgcgtgctgatcgacagcgcgaaacccgatcaggccgagatcgagatcggcgac
gagtatgaggtcgcgccgcagggcgcggtgctgctcacctggacgagcgcgtgggcggca
tga
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