Sphingomonas radiodurans: LLW23_03050
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Entry
LLW23_03050 CDS
T08717
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
srad
Sphingomonas radiodurans
Pathway
srad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LLW23_03050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srad03021
]
LLW23_03050
03400 DNA repair and recombination proteins [BR:
srad03400
]
LLW23_03050
Enzymes [BR:
srad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LLW23_03050
Transcription machinery [BR:
srad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LLW23_03050
DNA repair and recombination proteins [BR:
srad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LLW23_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
WBH17112
LinkDB
All DBs
Position
complement(640305..641366)
Genome browser
AA seq
353 aa
AA seq
DB search
MSVNAKNWQELKKPNTLEKKGGDGKRKSTFIAEPLERGFGLTLGNALRRVLLSSLQGAAV
TSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMQGEGPKRLQLSATGPAEVKAGDIA
VSGDIEVMNPELIICHLDEGATLNMELTADTGKGYVPATVNRPADAPIGLIPVDALYSPV
RQVSYKVDPTRVGQDLDYDKLTLTVETDGTVTPEDAVGYAGRILQDQLALFVHFDDSIVQ
RSAPVGMAAPVPTGEIASDTQQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVGKTE
AEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQEIMG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgtcaacgctaagaactggcaggaactgaagaagcccaacacgctcgaaaagaag
ggcggagatggcaagcgcaagtcgactttcatcgccgaaccgctcgagcgtggcttcggc
ctgaccctcggcaacgcgcttcgccgcgtattgctgtcgagcctgcagggtgccgccgtc
acgtcgatcaagatcgaaaacgtgctgcacgaattttcgagcctcgccggtgtgcgcgag
gatgtgaccgatatcgtcctcaacgtgaagcagatcgcgttgaagatgcagggcgaaggg
cccaagcggctgcagctttccgccaccggcccggccgaggtgaaggccggcgacatcgcg
gtgtcgggtgatatcgaggtgatgaaccccgagctgatcatctgccatctcgacgaaggc
gcgacgctcaacatggagctgactgccgacaccggtaagggatatgtgcccgcgaccgtc
aaccgcccggccgatgcgccgatcggcctgatcccggtcgacgcgttgtattcgccggtt
cgccaagtcagctacaaggtcgatccgacccgcgttggccaggatctggattatgacaag
ctgaccctgacggtcgagaccgacggcacggtgacgcctgaggacgccgtcggctacgcc
ggtcgcatcctgcaggatcagctcgcactgttcgtccacttcgacgattcgatcgtccag
cgttcggctccggtcggcatggccgctccggttccgactggtgagatcgccagcgatacg
cagcagatcaatcgttacctgctcaagaaggtggacgagctcgaactgtcggtgcgttcg
gccaactgcctcaagaacgacaacatcatctacatcggtgatctcgtcgggaagaccgag
gcggagatgctgcgcaccccgaacttcggccgcaagtcgctcaacgagatcaaggaagtg
ctctcgagcatgggcctccgcctgggcatggaaatccccggctggccgcctgagaacatc
gaagagatggccaagaagctcgagcaggagattatgggctga
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