Sphingomonas radiodurans: LLW23_03335
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Entry
LLW23_03335 CDS
T08717
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
srad
Sphingomonas radiodurans
Pathway
srad03410
Base excision repair
srad03430
Mismatch repair
srad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LLW23_03335 (recJ)
03430 Mismatch repair
LLW23_03335 (recJ)
03440 Homologous recombination
LLW23_03335 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srad03400
]
LLW23_03335 (recJ)
DNA repair and recombination proteins [BR:
srad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LLW23_03335 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LLW23_03335 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LLW23_03335 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WBH17166
LinkDB
All DBs
Position
complement(684266..686011)
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AA seq
581 aa
AA seq
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MMHVLGVERSILGQPWRWRATASDNLSLDDLVTQLLLARGCPREALDDHRTPSIRAFMPD
PSIFRDMDRAAERLADAVVAGEKVAVFGDYDVDGATSAAVMILLLRDLGIEARAYIPDRM
LEGYGPTAGAMERLAGEGATLIVTVDCGAQAFDALAAASAVPVDVIVVDHHQCASALPIA
HAVVNPNRLDEGEGAAHGHLAAVGVAFLLGAALLRVLRKRDFFAGRAEPRLLDLLDLVAL
GTVADVAQLRGLNRAFVAQGLKVMAARRNVGLAALIEASRLTRAPTATDLGFALGPRINA
GGRVGRADLGVRLLTTRDPDEARAIAAELDRLNEERRAIETAVQAEAEALYPTSRMVTVV
AGRGWHPGVIGIVAGRLKEKLGLPAIVIAVDEAGVGKGSGRSIPGVDLGQAVLAAKEAGL
LVAGGGHAMAAGLTIEADKVPAFADFLEELLAVRVAAAVADRALLVDSVHAPGGVTPDLV
TALEVGGPYGMGWPSPRVAIGPVRAVRVDVVGNGHVRAIVAGDDGRSLKAMAFRAADTPL
GAALLGAAPHRKLWLAGRAKIDDWAQRPAAELHIDDAAWAD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacgtcttgggggtcgagcggtcgatcctgggccagccgtggcgctggcgcgcg
accgcttcggacaatctgtcgctcgacgatctggtgacgcaattgctgctcgcgcgcggc
tgcccgcgcgaggcgctcgacgatcatcgcacgccatcgatccgcgcgttcatgcccgat
ccgtcgatcttccgtgacatggaccgtgccgctgagcggcttgccgatgctgtggtcgcg
ggcgaaaaggtggcggtgttcggcgattacgacgtcgatggcgcgacctcggcagcagtg
atgatcctgctgctgcgcgacctggggatcgaggcgcgcgcctatatccccgaccgcatg
ctcgagggctatggcccaaccgcgggagcgatggagcggctcgcgggcgagggcgcaacg
ctgatcgtgacggtcgattgcggggcgcaagcgttcgacgcgcttgccgcggcgagtgca
gtgccggtcgacgtgatcgtcgtcgatcatcatcaatgcgcgagcgcgctgccgatcgcg
catgcggtggtgaaccccaatcgcctcgacgagggggagggggcggcgcatgggcatctg
gctgcggtcggcgtcgcgtttttgctgggtgcggcgctgttgcgcgtgttgcgcaagcgc
gacttttttgccgggcgggccgagccgcggctgctcgacctgctcgatctcgttgcgctg
ggcacggtagccgatgtggcgcagcttcgcgggctcaatcgcgcgttcgtggcgcagggg
ctgaaggtgatggcggcgcgacgcaatgtcgggctcgccgcgctgatcgaagcgtcgcgg
ctgacgcgagcgccgaccgcgaccgatctgggcttcgcgttggggccgcggatcaatgcc
ggtgggcgcgtcgggcgggcggacctgggtgtgcggttgctcacgacgcgcgatccggac
gaagcgcgcgcgatcgccgccgagctggaccggctgaacgaggagcgccgggcgatcgag
acggcggtgcaggccgaggcggaagcgctgtatcccacgagccgaatggtgacggtggtg
gcggggcgcggctggcatcccggcgtgatcggcatcgtcgccgggcggctgaaggagaag
ctcggcctgccggcgatcgtcatcgcagtcgatgaggcgggagtcggcaagggatctggg
cggtcgatcccgggcgtcgacttggggcaggccgtgcttgcggcgaaggaggcggggttg
ctcgtcgccggcggcgggcatgcgatggcggcggggttgacgatcgaggccgacaaggtg
ccggcgttcgccgatttcctcgaggagcttctggcggtgcgggtggcggccgcggtcgcg
gaccgtgcgttgctggtcgattcggtgcatgcgccgggcggtgttacgcccgatttggtc
actgcgctcgaggtcggcgggccgtatggcatgggctggccgtcgccgcgggtcgcgatt
ggccccgtgcgggcggtgcgggtcgatgtggtcggcaacggccatgtccgcgcgatcgta
gcgggggacgacgggcgtagcctaaaggcgatggcgttccgtgctgccgatacgccgctc
ggcgcggcgttgcttggcgcagcgccacatcgcaagctatggctcgccgggcgcgcgaag
atcgatgattgggcgcagcggccggcggcggaactgcacatcgacgatgcggcctgggca
gactga
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