Sphingomonas radiodurans: LLW23_03475
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Entry
LLW23_03475 CDS
T08717
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
srad
Sphingomonas radiodurans
Pathway
srad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLW23_03475 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srad03019
]
LLW23_03475 (groL)
03110 Chaperones and folding catalysts [BR:
srad03110
]
LLW23_03475 (groL)
03029 Mitochondrial biogenesis [BR:
srad03029
]
LLW23_03475 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srad04147
]
LLW23_03475 (groL)
Enzymes [BR:
srad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LLW23_03475 (groL)
Messenger RNA biogenesis [BR:
srad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LLW23_03475 (groL)
Chaperones and folding catalysts [BR:
srad03110
]
Heat shock proteins
HSP60 / Chaperonin
LLW23_03475 (groL)
Mitochondrial biogenesis [BR:
srad03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LLW23_03475 (groL)
Exosome [BR:
srad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LLW23_03475 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LLW23_03475 (groL)
Exosomal proteins of breast cancer cells
LLW23_03475 (groL)
Exosomal proteins of colorectal cancer cells
LLW23_03475 (groL)
Exosomal proteins of bladder cancer cells
LLW23_03475 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WBH17190
LinkDB
All DBs
Position
706246..707883
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDVKFGRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DIAVIKVVEDVKARSKPVSGSAEIAQVGIISANGDKEVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPEKMSVELTDPYILIHEKKLSNLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTKGEV
ISEDLGIKLETVTLGMLGTAKRVSIDKDNTVIVDGAGDSDAIKGRTEAIRQQIEVTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALDGLKGVNEDQTRGIDIVRKSLTALVRQIAQNAGHDGAVVSGKLLDQDDTSFGFN
ASTDVYENLVTAGVIDPTKVVRTALQNAASVAGLLITTEATVSELPDDKPAMPAMGGGGM
GGMDF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacgtaaaattcggtcgtgacgcgcgtgagcgcatcctgcgcggcgtc
gacattctcgccgatgcagtgaaggttacgctggggccaaagggccgcaacgtcgtcatc
gacaagagcttcggcgcaccgcgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcaaggacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcctcgaag
accaacgacatcgccggtgacggcaccaccaccgcgaccgttctcgctcaggcgatcgtt
cgcgagggcatgaagtcggttgcagccggcatgaacccgatggatctgaagcgcggcatc
gatatcgccgtgatcaaggtcgttgaggacgtgaaggcacgctctaagccggtgtcgggt
tcggccgagatcgcccaggtcggcatcatctccgcgaacggcgacaaggaagtcggcgag
aagatcgcggaagcgatggagaaggtcggtaaagaaggcgtgatcaccgtcgaggaagcg
aagggtctcgaattcgagctcgacgttgtcgagggcatgcagttcgaccgcggctatctg
tcgccatacttcatcaccaacccggagaagatgtcggtcgaactcaccgatccgtacatc
ctgatccacgagaagaagctgtcgaacctgcaggcgatgctcccgatcctggaagcagtc
gtgcagtcgggtcgcccgctgctgatcatcgccgaggacatcgagggcgaggctctggcc
acgctcgtcgtgaacaagctgcgcggcggcctgaaggtcgcagcggtcaaggcaccgggc
ttcggcgatcgtcgcaaggcgatgctcgaggacatcgctgtccttaccaagggcgaagtg
atcagcgaggatctcggcatcaagctcgagaccgttacgctgggcatgctcggcaccgcc
aagcgcgtgtcgatcgacaaggacaacacggtcatcgtcgacggcgccggtgattccgat
gcgatcaagggccgcaccgaagcgatccgtcagcagatcgaggtcacgacctcggactat
gaccgcgagaagctgcaggagcgtctcgccaagctcgctggcggcgttgccgtcatcaag
gtcggcggcgccaccgaggtcgaggtcaaggagcgcaaggatcgcgtcgacgacgccctc
cacgcaactcgcgcagcagtcgaagagggcatcgtccccggcggcggcacggccctcctg
tacgcaacgaaggcactcgacggcctgaagggcgtgaacgaggaccagacgcgcggtatc
gacatcgtccgcaagtcgctaaccgctctggttcgccagatcgcgcagaacgccggccat
gacggcgccgtggtttcgggcaagctgctcgaccaggacgacacgtcgttcggcttcaat
gcttcgaccgacgtgtacgagaacctcgtcaccgccggcgtgatcgacccgaccaaggtc
gtccgcaccgcgctgcagaacgccgcatcggtggctggtctcctgatcaccaccgaagcg
accgtttcggagctgccggacgacaagcccgcgatgcccgcaatgggcggcggcggcatg
ggcggcatggacttctga
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