Sphingomonas radiodurans: LLW23_05720
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Entry
LLW23_05720 CDS
T08717
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
srad
Sphingomonas radiodurans
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srad03016
]
LLW23_05720
Enzymes [BR:
srad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LLW23_05720
Transfer RNA biogenesis [BR:
srad03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LLW23_05720
Prokaryotic type
LLW23_05720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
DUF7546
Rv3627c_N
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WBH17600
LinkDB
All DBs
Position
complement(1188504..1189595)
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AA seq
363 aa
AA seq
DB search
MMRHRLRWIGGAVAVVLVVVLAALPGAVGRQIGATVVDMRAGVDATAGLPDGLHVALCGS
GSPLPDPTRAGPCSVVIAGRHLFMVDAGEGGARNMVLMRIPNARVEAVFLTHLHSDHIDG
LPPAMLLRWTGANATRPLPVYGPAGTRRVVDGFNRAYAIDQGFRTAHHGPAIAPPSGAGG
IGHDIALAPPGDWSPVTVFSGDGITVSAFRVDHGPVEPAIGYRFTYKGRSIVFSGDTSAT
PAIVRNARGADLLVHEALQPRLTAAMTRTLDRRDQPGLAKITRDILTYHATPEQVADEAQ
AAGVRHLVFSHVIPQLPSRLMYAAFLGDARRRFGGTITVGEDGMVFSLPAGTDGFEYRDW
PVR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggcatcgattgcgctggatcggcggtgcggtcgccgtcgtcctggtcgttgtg
ctcgcagcgttgcctggcgcggtcggccggcagatcggtgccaccgtggtggacatgcgc
gcgggggtcgacgccacggcgggtctgccggatggtctccacgtcgcgctatgtggatcg
ggatccccgctgcccgatcccacgcgcgccgggccgtgcagcgtcgtgatcgccggtcgt
cacctgttcatggtcgatgccggcgaaggcggcgcacgcaacatggtgctgatgcggatc
cccaatgcgcgcgtcgaagcggtcttcctgacgcatctgcattcggaccatatcgatgga
ttgccgccagcgatgctgctgcggtggaccggcgcgaacgcgacgcgcccgctgccggta
tacggcccggcgggaacgcggcgcgtcgtcgatggcttcaaccgtgcctatgccatcgac
cagggctttcgcaccgcgcatcacggcccggcaatcgcgccgccgtcaggggcggggggt
atcgggcacgacatcgcacttgcgccaccaggcgattggtcccccgtcaccgtcttctcc
ggcgacgggatcactgtaagtgctttccgcgtcgaccacggcccagtcgagccggcgatc
ggctatcgtttcacctacaagggccgctcgatcgtgttcagcggcgataccagcgcaacg
cccgcgatcgtgcgcaacgcccgtggcgccgatctgctggtgcacgaggcgctgcaacca
cgcctcaccgccgcgatgaccaggacgctcgatcgccgcgatcagccggggcttgccaag
atcacgcgcgatatcctcacgtaccacgccacacccgaacaggtggcggacgaggcgcaa
gcggccggcgtgcgccatctcgtgttcagtcacgtcatcccgcaactgccctcgcggctg
atgtatgccgcgttcctcggcgacgcccggcgccgcttcggcggcacgataaccgtcggc
gaggacggcatggtcttttccctccccgccggaaccgacggcttcgaatatcgcgactgg
ccggtgagataa
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