Sphingomonas radiodurans: LLW23_09455
Help
Entry
LLW23_09455 CDS
T08717
Name
(GenBank) DegT/DnrJ/EryC1/StrS family aminotransferase
KO
K21131
GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase [EC:
4.2.1.168
]
Organism
srad
Sphingomonas radiodurans
Pathway
srad00541
Biosynthesis of various nucleotide sugars
srad01100
Metabolic pathways
srad01250
Biosynthesis of nucleotide sugars
Module
srad_M01017
GDP-L-Col biosynthesis, GDP-Man => GDP-L-Col
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LLW23_09455
Enzymes [BR:
srad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.168 GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase
LLW23_09455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WBH15095
LinkDB
All DBs
Position
2024125..2025300
Genome browser
AA seq
391 aa
AA seq
DB search
MNKRFPLATTSWDEAEYQAMQDVIASGQFSMGPKVKAFEEAFAAYTGTRYAVMCNSGSSA
NLLMIAALRFTKNSALRLDKGDEVLVPAVSWSTTYSPLEQYGLHVRFVDIDLATLNFDLV
ALEAAITPRTRAIFCVNLLGNPNDFAAIRVLADKHSLIVLEDNCESMGAEFAGRKTGSFG
AMGSQSCFFSHHISTMEGGLVTTDVEELYHLMLSLRAHGWTRQLPIDNQVVGRKGGDAFE
ESFRFVLPGYNLRPLELSGAIGIHQIAKLPRLIEERRRNGALLQQHLSNHPDLIIQQEIG
KSSWFGFSLVIRPGSAMTRATLMQQLEALGFEYRPIVSGNFARKEVVRYFDHSICGNLSN
ADHIDGNGLFIGNHHYPIDEAIEALKTIAAN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcggttcccactcgccacgacctcatgggacgaggcagaatatcaggcgatg
caggacgtcattgcctctggccagttctcaatggggccgaaggtaaaggcctttgaggaa
gcctttgccgcctacaccggcacgcgctatgcggtgatgtgcaattcgggatcgtcggcc
aacctgctgatgatcgcagcgctgcgctttactaagaactcggcgctgcgtcttgacaaa
ggcgacgaggtgctggtgcccgcggtgtcgtggagcacgacgtacagcccgctcgaacaa
tatggcctgcacgttcgcttcgtagatatcgacttggcgacgctaaattttgatctggtt
gcgctggaagctgctattacaccgcgaacgcgggcgattttctgcgtcaacctgctgggg
aatcccaacgacttcgccgcgatccgcgtgctggccgacaagcacagcctaattgtgctt
gaagataattgcgaatcgatgggtgccgaattcgcgggtcgtaagaccggctcgttcggg
gcgatgggcagccagagctgcttcttctcgcaccatatctcgacaatggaaggtggactt
gtcaccaccgatgtcgaagaactctatcacctgatgctgtcgctgcgtgcgcatggctgg
acccggcagttgccaatcgataatcaggtggtcggacgaaagggtggcgatgcgttcgag
gaatcgttccgttttgtactgccgggttacaatctgcgcccgctggaactgtcgggtgcg
attggcattcatcagatcgctaagttgccgcgcctgatcgaggaacgccggcgtaacggc
gcactcttgcaacagcatctgtctaatcatcccgacctgatcatccagcaggaaatcggc
aagagcagctggtttggcttcagtctggtcatccgtcctggaagcgcaatgacgcgggca
acgctgatgcagcagcttgaagcgctagggttcgaatatcgcccgatcgtcagcgggaac
tttgctcgcaaagaagtagtgcgttattttgaccatagcatatgcggcaatctgtccaac
gccgaccacatcgacggcaatggccttttcattggcaatcaccattacccgatcgacgaa
gcgatcgaggcgctaaaaacaatcgcggcaaactaa
DBGET
integrated database retrieval system
