Sphingomonas radiodurans: LLW23_09715
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Entry
LLW23_09715 CDS
T08717
Name
(GenBank) autotransporter domain-containing protein
Organism
srad
Sphingomonas radiodurans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
DUF1707
Motif
Other DBs
NCBI-ProteinID:
WBH15140
LinkDB
All DBs
Position
complement(2084780..2090104)
Genome browser
AA seq
1774 aa
AA seq
DB search
MIKYRFRSATGASVLALSLAAACPVRADELKPVYSPPADNGGGTEPEQTGVIDIFQRTDT
IEGDYNLRGTSARRFEFVTDSIATRQQRGEVVSGFDAIAGRSALGLTSEQKSQAITYPDL
VQGTRRSTVVYDNDRLAEVASDTTPAITFVDTNTPVYGDLRLANISQSTVAILTGDKSRD
IYDASNFALLTADTGSTLYNATNGSDITYDSVTSTMHGADQDGLSQMSTTVVQALVTDYS
GIGFDGTDRVTDLASLKRYNTSLIAQLSTGQITPDQYEERIQAAVSTAPRAVTVRTPEIP
TYTAPPTTSDRLFMALNASTLTTTLDSQLVGVIVADGNEDGLSTLILARGGSTVTNNGTI
VQGGSGVGIRVTDAGTSLANSATGVIGVGYETLDRSSGTPVPSGFTDYQGATYGNTAVRV
TDGAVVDNRGIINVSNRDIAGHDEEPRFGKANNGIVVSTGAQATNAGTILIGGGDSAVAN
TPGPFNGATGMAVFDGGSATNAAGGVIRVGSTFAGNAGELAAVTDVLSTNNASGMVSLGG
GGAAFNDGLISVGSRAQNANGMVVGGAGNTARNDGTITIEATQLTEPSGRNVGIAVLGSS
AAGIFNATNGGTINVNGVNSVGLVVENNVAGGAARAVNDGLIAINGSLSIDRLRNYGIFV
GNASSSAVNNGQVMMRGEGAIGIHARNGGTVSVGAGGSVDFQNVDQIGYYALGAGSSIAG
AGMTDVDTERSTGLRIEGGADAMGTGLVLNVSGASAFGVVASGASTQTTFDAANASITVS
GNAATGVRIEGGATGRLGADTVLTLSGANTTAAIVDGQAFGLDGVAVGLPVTTTSLVSNA
TVTAGSNNLTGYVAQDDGQLQHGGTLAFTGADGTGIRILGANSSATHTGSIALSGSGTGV
AVLGGRFSNQGSISVANGTGILLDGAGSTLAGSGTSAVLASDGIAALRVINGATVDAGGG
FSGGGTAQAVLVDTGAGAVTLGGGTLTTTGSGNGIENAANSPAIRLNGTTIRVDGSGSGI
RTAVSLDPATTATITAAGANSTGFTFAGTDGGVTRGDLALGSGYSITASGTGATGVRLAT
TGSATLATDISVTAAQGGSALIAGPAALVTNTGTLRSVSSAPVVDLTGGTRAFVTSGTIA
AASPTAAAITGGNNGQSVTVSGGAITGIVALGTGADTFTMTAGTLTGSLATGAGNDTATF
RGLTDANLSGATSIAGNGTAGGSDVLNFQNSNMTGTTRLTGWNTINLTASTLVSNGNLTL
AGGTMTIDRGSTFRAGAGSNTTVSAAAGGTATLVNAGRIDLTNGTSGATDQLVVRGNYVG
QDGRLALQTVLGTDGSPSDQLIIDGGAASGRTAIEITNLGGLGAATSGNGIQLVGAINGG
TTTATTTKDAFTLAGGQVSAGAFEYRLFASNTTGTDEGWYLRTQANTPTPTPTPTPTPTP
TDPVTPAPTTFRVEAPLLAALPGWLRQGDLDFLGTYHRRVGDRIGRLETTPGFTVPGRIW
GRFLLDDSRYRQAGTVSPSVDGRTYGFQLGVDLFQFNNGSGRHDFGIYGGHTDGSATVRG
FASGIQDLNVGRLRPKTIYAGLYWTYSSDRFYVDTVVQRSWYGGEARAVSGNRIDIDGSG
ILASVETGYALQLSARWSLEPQAQLIAQGVSLDPVAIPAATVFQDSDGYLTGRLGLRLKG
DYAMGGGSVQPYVRANLWKGFASTDRTIFVTPTAATSIDTRNASLWGEAGGGLTWSPATR
FAVYGEATHRFSLDNGQGVVGHSTGGAVGAKLRF
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaagtatcgctttcgctccgctaccggtgcttccgttctggcattgagccttgcc
gccgcctgccctgtccgcgcggatgagctcaagccggtctactcgccacctgctgacaat
gggggcggcacggagcccgagcagaccggcgtgatcgacatcttccagcgcaccgatacg
attgagggcgactacaatctgcgcggtaccagcgcccgccgctttgaattcgttaccgat
agcattgcgacgcgtcagcagcgcggcgaagtggtgtccggctttgacgcaatcgctggc
cgaagtgcgctcgggttgacgtcggagcagaaaagtcaggcgatcacctaccctgatctg
gtgcagggcacgcgccgctccaccgtcgtctacgacaatgatcgccttgcggaagtagcg
agcgacacgacaccagcaatcacgtttgtcgatacgaacacgcccgtctacggtgacctt
cggcttgcgaatatcagccagtcgaccgttgccattctcacgggcgacaagagccgagac
atttacgacgcgtccaatttcgcgctgctgaccgcggacaccggctcgacgctgtacaac
gcgaccaacggcagcgacatcacgtacgactcggtaacctccacaatgcacggcgcggat
caggacggcctgtctcaaatgtcgaccaccgtcgtgcaggcgctcgtgactgactattcc
ggcatcggctttgacggcaccgatcgcgtcaccgatctcgccagcctgaagcgctacaac
accagcctcatcgcgcaactgagcaccggccagataacacccgatcaatatgaagagcgc
atccaagccgccgtcagcaccgcgccgcgggccgttacggtccgcacgcccgagatcccg
acttataccgctccgccgacgaccagcgaccggctgttcatggcgctgaatgcctccacg
ctgaccactacgctcgattcccagctcgtcggcgtcatcgttgcggacgggaacgaggac
ggcctctcgactctgatcctcgcgcgcggcggctccaccgtcactaacaatgggacgatc
gttcagggcggcagtggcgtcggcatccgcgtaaccgacgccggcacttcactggcgaac
agcgccaccggtgtgatcggcgtcggatacgaaacgctggatcgatcgagcgggacaccg
gtgccaagcggcttcaccgactatcagggcgcaacctacggcaacaccgcggtgcgcgtg
accgatggggcggttgtcgacaaccgcggcatcatcaacgtgtcgaaccgcgatatcgcc
ggacatgatgaggaaccgcgtttcggcaaggccaacaacggcatcgtcgtcagcactggc
gcgcaagccaccaatgccggcacgatcctgatcggcggcggcgacagcgcggtcgcaaat
acgccggggccgttcaacggcgcgaccgggatggccgtcttcgacggcggatcggccacc
aacgccgccggcggcgtgatccgcgtcggctcgacctttgcggggaatgccggcgaactt
gcggcagtcacggacgtgctgtcgaccaacaatgcgtcgggcatggtgtcgctgggcggt
ggcggggctgccttcaacgacgggctgatcagcgtcggttcgcgcgcgcagaatgccaac
ggcatggtcgtcggcggtgcgggcaacacggcacgcaacgatggcacaataaccatcgaa
gcgacacagttgaccgagccgagcgggcgcaatgtcgggatcgcagtgctcggcagcagt
gcggcagggatcttcaacgccacgaacggcgggacgatcaacgtcaatggcgtgaacagc
gtcgggctggtcgttgagaacaatgtggccggtggtgcggcacgcgcggtcaacgatggg
ctgatcgcgatcaacggcagcctgtcgatcgatcggctgcgcaactacggcattttcgtc
ggcaatgcgtcatcttcggcggtcaacaacggccaagtcatgatgcgtggcgagggcgcc
attggcatccacgcgcgcaatggcggcacggtatcggtgggcgcgggcggctccgtcgat
ttccagaacgtcgaccagatcggctattatgcgctaggcgcgggatcgagcatcgccggc
gcgggcatgaccgacgtcgacacggagcgttcgaccggcctgcgcatcgagggcggcgcc
gacgcgatgggcaccgggctggtgctgaacgtgtcaggcgcatccgcattcggcgttgtc
gcgtcgggcgcatcgacgcaaactaccttcgacgccgccaatgccagcatcaccgtttcc
ggcaatgcggcgaccggcgttcggatcgagggcggcgcgacgggtcggctgggcgcagac
acagtacttaccttgagcggcgcgaacacgacggcggcgatcgtcgatggtcaggccttc
gggcttgacggcgtggcagtgggcttacctgttacaaccacgtcgctcgtaagcaacgcc
acggtcacggctggatcgaacaatctcaccggttacgtcgcgcaggatgacgggcagctg
cagcatggcggcacgctcgcgttcaccggcgcggacggcacgggcatccgcattctgggc
gcaaactcgtccgcgacgcataccggcagcattgcgctcagtggcagcggcacgggggtc
gccgtcctcggcgggcgcttctccaatcaaggcagcatttccgtcgcgaacggcactggc
atcctgctcgacggtgccggttcgaccctagcaggcagcggcacctccgctgtccttgcc
agcgatggcattgcggcgctgcgcgtcatcaacggcgcgacggtcgacgctggcggtggc
ttcagcggcggtggcaccgctcaggccgtgttggtcgatactggtgccggcgcagtgacg
ctgggcggcggcacgctgacgacgacgggtagcggcaacggcatcgaaaacgccgctaac
agccctgctattcgcctgaacggcaccacgatccgcgtcgacggttctgggtcgggcatt
cgcaccgcagtctcgcttgatccggcgactaccgccacgatcaccgctgcgggcgccaac
agcacgggcttcacctttgccggtaccgatggcggcgtgacgaggggtgatctggcgttg
ggcagcggctattccatcactgcttcaggcaccggtgcgacaggcgtgcgcctcgcgacg
accggctcggcgacactggcaactgatatttcggtcactgccgcgcaaggcggctcggcg
ctgatcgccggacctgccgcgctggtcaccaacaccggcacgttgcgctcggtctcctcc
gcgccagtcgtggacctgacgggcggcacacgcgcgttcgtcacgagcggcacgatcgcc
gctgcttcacccacggccgccgcgattactggcggcaacaatggccagtcggtgaccgtg
tcgggcggcgcaataaccggcatcgtcgcgctcggtaccggcgccgatacgttcacgatg
acagcgggcacgctgaccggttcgctcgcgaccggcgccggcaacgacacagccacgttc
cgcggcctcaccgacgcgaacctgtcgggcgccaccagcatcgccggtaacggcacggcg
ggtggcagcgacgtactcaacttccagaacagcaatatgacgggcacgacccggctgacc
ggatggaacacgatcaacctcactgcatcgacgcttgtctcgaacggcaacctgacactc
gccggcggcacgatgacgatcgaccgcggttcgaccttccgggcgggcgcaggatcgaac
acgacggtcagcgctgcggccggtggcaccgcaacgctggtcaacgccggacggattgac
ctgaccaacgggacatccggcgcgaccgaccagttggtggttcgcggtaactatgtcggg
caggacggtcggcttgcgctccagacggtgctcggtaccgacggctcgccgtccgaccag
ctgatcatcgacggcggcgcggcgagcggccgcacggcgatcgagatcaccaacctcggc
ggcctaggcgcggcgacaagcggcaatggcattcagctggtcggcgcgatcaacggcggc
accaccaccgcgacgacaaccaaggatgcgttcacgctcgctggcggacaggtcagcgct
ggtgcgttcgagtaccgactgtttgcttcgaacacgaccggtaccgacgagggctggtac
ctccgcacccaggccaacacgcctacgccaaccccaacaccgacaccgacaccgacacca
accgacccggtcacgccggcgcctaccacattccgtgtcgaagcgccgctgctggccgcc
ctgccaggctggctgcgccagggtgaccttgacttcctcggcacctatcatcgtcgggtc
ggtgaccggatcggccgtttggaaacgacgccggggttcaccgtaccgggccgaatctgg
ggacggttcctgctggatgattcgcgctatcgccaggcaggcacggtcagcccgtcggtc
gatggccgtacatacgggttccagctgggcgtcgacctgtttcagttcaacaacggttcg
ggccgacacgattttggtatctacggtggccataccgatggcagcgcaaccgttcgcggc
ttcgccagcggcatacaggatctgaacgtcggacggctgcgccccaagacgatctatgct
ggcctctactggacttactcgagcgaccgtttctacgtcgataccgtcgtgcagcgcagc
tggtacggcggcgaagcgcgggccgtgagcggaaaccgcatcgacatcgatgggtctggc
atcctggcttctgtcgagacaggctatgcgctgcagctttcggcgcgctggtcgctcgag
ccgcaagcgcaacttatcgcacaaggcgtctcgcttgatccggtcgcaattcccgccgca
accgtcttccaggatagcgacggctacctgacgggccggctcgggcttcggctcaagggc
gactacgccatgggcggcggcagcgtgcagccatatgtgcgcgcaaatctgtggaagggc
ttcgcctcgaccgaccggacgatcttcgtaacgccaacggcagcaacgtcgatcgacacg
cggaacgcctcgctatggggcgaagcgggcggcggtctcacctggtctccggccaccagg
ttcgcggtttatggagaggcgacccaccgattctcgctagacaacggccaaggtgtcgtc
ggccattcgactggcggcgcggtcggggcaaagctgcgcttctag
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