Sphingomonas radiodurans: LLW23_12635
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Entry
LLW23_12635 CDS
T08717
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
srad
Sphingomonas radiodurans
Pathway
srad02020
Two-component system
srad02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LLW23_12635
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LLW23_12635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srad03021
]
LLW23_12635
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
srad02035
]
LLW23_12635
Transcription machinery [BR:
srad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LLW23_12635
Bacterial motility proteins [BR:
srad02035
]
Flagellar system
Flagellar assembly proteins
Stator
LLW23_12635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
PhyR_sigma2
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
WBH15661
LinkDB
All DBs
Position
2697681..2698430
Genome browser
AA seq
249 aa
AA seq
DB search
MSAEPNRAAFEQPTPLTYSPRTRAREEGALVREHLPLVRRLAWHIHGSVSTAVEVEDLVQ
TGLVALVEAAGSFEDRGQVTFKQYLATRLRGAMIDELRRHAAMTRGAIKRRREYHRAIQA
LTGELGRTPKEAETADRLGVSVEKLRADYATAEAAKFDSIDEVYADDQPWFASDTPSAFD
QLAEGQQRDRLIAAITALPEREQMVIQLYHVEELNLDEIGQVLGVGAARVCQIKAAAHAK
LKKAMLRNL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgagccgaatcgcgccgcgttcgagcaaccgacgccgcttacttattccccg
cgcacgcgcgcacgcgaggaaggggcgctggtgcgcgagcatctgccactcgtccggcgg
ctcgcctggcatattcacggaagcgtctcgaccgcggtcgaagtggaggatctggtgcaa
acaggattggtggcgctggtcgaagcggccggatcattcgaggatcgcgggcaagtcacg
ttcaagcaatatctcgcgacccggctgcgcggtgcgatgatcgacgagttgcgtcgccac
gccgcgatgacgcgcggcgcgatcaagcgccggcgcgagtatcatcgcgcgatccaggcg
ctaaccggcgaactgggacgcacgcccaaggaggccgagacggcggaccggctcggcgtc
tccgtcgagaagctgcgcgccgactatgccaccgccgaagcggcgaagttcgattcgatc
gacgaagtctatgccgacgatcagccctggttcgccagcgacacgccgagcgccttcgat
cagctcgcggaggggcagcaacgcgaccggctgatcgctgcgattaccgccttgcccgag
cgcgagcagatggtgatccagctctaccacgtcgaggaactgaacctcgacgagatcggt
caggtgctcggggtcggggccgcacgtgtatgccagatcaaggccgcggcacatgccaag
ttaaagaaggcgatgcttcgcaacctttga
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