Sphingomonas radiodurans: LLW23_14370
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Entry
LLW23_14370 CDS
T08717
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
srad
Sphingomonas radiodurans
Pathway
srad02024
Quorum sensing
srad03060
Protein export
srad03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LLW23_14370 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LLW23_14370 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LLW23_14370 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
srad02044
]
LLW23_14370 (ffh)
Enzymes [BR:
srad01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LLW23_14370 (ffh)
Secretion system [BR:
srad02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LLW23_14370 (ffh)
Eukaryotic Sec-SRP protein
LLW23_14370 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
AAA_33
TctA
Zeta_toxin
NACHT
ABC_tran
AAA_25
AAA
AAA_19
GTP_EFTU
AAA_14
AAA_16
AAA_18
6PF2K
Motif
Other DBs
NCBI-ProteinID:
WBH15976
LinkDB
All DBs
Position
3055653..3057173
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AA seq
506 aa
AA seq
DB search
MFDSLSDRLGGVFDRLRGRGALTEADVRQAMREVRVALLEADVALPVARKFVDDATEKAI
GQNVLRSITPGQQVVKIVHDALIEMLGGDDPQAAELDLGVTPPAIIMMVGLQGSGKTTTT
AKIAKRLSAGQMGRDRKKVLMASLDVNRPNAQEQLATLGTQVEVQTLPIIVGQQPVDIAR
RAMQAAKLQGFDVLMLDTAGRLHVDQALMDEMKAVADIARPQEILLVVDSLTGQDAVNVA
QNFSDQVPLTGVVLTRLDGDARGGAALSMRAVTGKPIKFAGVGEKMDALEAFHAERVAGR
ILGMGDVVSLVEKAAESIQQEDAEKMATKLAKGQFDLDDLRSQLAQMRRMGGLGALAGMM
PGMKKAQQAMASGAVDERILLRMDAMITSMTQKERSKPEVINAKRKIRIAKGSGTTVQDV
NKLLKMHQEMASAMKKIRKMGGIKGMLAMLGKGGPGGGMGGLGNALGGPELGEMLGKAGG
GLPGLPNGLGGMGGGSLPPGFPKFKK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacagcctgagcgatcgtcttggcggcgtgttcgaccgcttgcgcggtcgtggc
gcgctgaccgaagcggacgtgcgccaggcgatgcgcgaagtgcgggtcgcattgctcgag
gccgatgtagcgctgcccgtagcgcgcaagttcgttgatgacgcgaccgaaaaggcgatc
ggccagaacgtccttcgctcgatcacgccagggcagcaggtcgtcaagatcgtccatgac
gcgctgatcgagatgctcggcggcgacgatccgcaagcggctgagctcgatctcggtgtc
acgccgccggcgatcatcatgatggtcggcctgcagggctcgggaaagacgaccacgacc
gccaagatcgccaagcggctgtcggccggtcagatgggccgggatcgcaagaaggtgctg
atggcgtcgctcgacgtcaatcgcccgaacgcgcaggaacagcttgccacgctcggcacg
caggtcgaggtccaaacgttgccgatcatcgtcggccagcaaccggtcgatatcgcgcgg
cgcgcaatgcaggcggcgaagctgcagggcttcgacgtgctgatgctcgacaccgccggt
cggctacacgtcgatcaggcgctgatggacgagatgaaggccgtagcggacatcgcccgt
ccgcaggaaatcctgctcgtcgttgacagcctgaccggtcaggacgcggtcaacgtcgcg
cagaacttctccgatcaggtgccgcttaccggcgtcgtgctgacccgcttggacggcgac
gcgcgcggtggcgcggcgctgtcgatgcgcgccgtcactggcaagccgatcaagttcgcc
ggtgtcggcgaaaagatggacgcgctcgaagcgttccacgccgagcgggtcgccggccgc
atcctcggcatgggcgatgtagtcagcctcgtcgaaaaggcagcggagtcgatccagcag
gaagacgccgagaagatggcaacgaagctggcaaagggccagttcgacctcgacgacctg
cgaagccagctggcgcagatgcgccgcatgggcgggctaggcgcgctggccggcatgatg
ccgggcatgaagaaggcgcaacaggcgatggcgtcgggcgccgtcgacgagcgcatcctg
ctgcgcatggacgcgatgatcacgtcgatgactcagaaggaacgctccaagcccgaggtg
atcaacgctaagcgcaagatccgcatcgccaagggcagcggcacgaccgtgcaggacgtg
aacaagttgctgaagatgcatcaggaaatggcctcggccatgaaaaagatccgcaagatg
ggcgggatcaagggaatgctggcgatgctcggcaagggcgggccggggggcggcatgggc
ggcctcggcaacgccttgggcggccccgagctcggcgagatgctgggcaaggccggcggc
gggcttcccggtctgccgaacggcctgggcggaatgggcggcggcagcctcccacccggt
tttccgaagttcaagaagtaa
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