Sphingomonas radiodurans: LLW23_15465
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Entry
LLW23_15465 CDS
T08717
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
srad
Sphingomonas radiodurans
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srad03032
]
LLW23_15465
03400 DNA repair and recombination proteins [BR:
srad03400
]
LLW23_15465
Enzymes [BR:
srad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LLW23_15465
DNA replication proteins [BR:
srad03032
]
Prokaryotic type
DNA Topoisomerases
LLW23_15465
DNA repair and recombination proteins [BR:
srad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LLW23_15465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WBH16185
LinkDB
All DBs
Position
complement(3275899..3276909)
Genome browser
AA seq
336 aa
AA seq
DB search
MASAAIIYHDDEEPGITRRKMRHGWGYFDPAGARITDRDEIERLNAIGLPPAYRDAWFCP
DPNGHIQAVGWDEKGRKQYRYHAEFRAAREDEKYNLCGSFGRALPKLRARVEVDLASRGH
SKEKTIAAIVKLLDVGHLRIGNEVYAKSNKSFGVTTLRDRHAEIRGSRLRLQYKAKSGKL
KTLTINDGSLARFVKKCQDLPGQKLFQYVDATGEPRPVTSGDVNTYIKEATGGDFTAKHF
RTWGASAIAFEALSAAKKNISLKTMLAPVTERLGNTPAIARKSYVHPALIALVKEGQEEF
RAALHLPRSTRWLSRAERGLIAFLDTGEVPSAQEAA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagcgcagcgatcatttatcatgacgacgaggaacccggcatcacccggcgcaag
atgcgccatggctggggctatttcgatcccgccggcgcgcgcatcaccgatcgggacgag
atcgaacggctgaatgcgatcgggctgccgccggcttaccgcgacgcatggttctgcccc
gaccccaacggccacattcaggcggtcggctgggacgagaaggggcgcaagcaatatcgc
tatcacgccgaattccgcgccgcgcgcgaggacgagaagtataatctgtgcggctcgttc
ggccgtgcgctgcccaagctgcgggcgcgggtcgaggtggatcttgcgagccgtgggcat
tcgaaggagaagacgatcgcggcgatcgtcaagttgctcgatgtcggccacctgcgcatc
ggcaacgaggtgtatgccaagagcaacaagagtttcggcgtcaccacccttcgcgatcga
cacgccgagatccgcggcagcaggctgcggctgcagtacaaagcgaaatcgggcaaactc
aagacgttgacgatcaacgacggcagcctcgcgcggttcgtgaagaagtgccaggatctg
cccggccagaagctgttccaatatgtcgatgccacgggcgaaccgcgaccggtgacgtcg
ggtgacgtcaacacttacatcaaggaggcgaccggcggggactttactgcgaagcatttc
cgcacctggggcgcgagcgccattgccttcgaggcgctgtcggccgccaagaagaacatc
agtctcaagacgatgcttgcaccagtgacagagcgacttggcaacacgccagcgatcgcg
cgcaaatcctatgttcatcccgcgctcatcgcgcttgtgaaagagggccaggaagaattc
cgtgccgcattgcatctcccccgctcgacgcgctggctcagccgcgccgaacgcgggttg
atcgcgttcctcgacaccggcgaggtgccatcggcgcaagaagcggcctga
DBGET
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