Sphingomonas radiodurans: LLW23_15985
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Entry
LLW23_15985 CDS
T08717
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
srad
Sphingomonas radiodurans
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srad03032
]
LLW23_15985
03036 Chromosome and associated proteins [BR:
srad03036
]
LLW23_15985
03400 DNA repair and recombination proteins [BR:
srad03400
]
LLW23_15985
DNA replication proteins [BR:
srad03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LLW23_15985
Chromosome and associated proteins [BR:
srad03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LLW23_15985
DNA repair and recombination proteins [BR:
srad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LLW23_15985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WBH16284
LinkDB
All DBs
Position
3381130..3381402
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQELIAAVANVSGLAKGDAGRAVEAVFDTIGAQLKKGDEVRLVGFGTFAVSKRKASTG
RNPRTGEPMTIKASSQPKFKAGKVLKDSLN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggagttgattgcggcggtcgcgaacgtgtccgggctcgccaagggcgat
gccggccgggcagtggaggcagtgttcgatacgatcggtgcacagttgaagaagggggac
gaggttcggttggttggcttcggcacgttcgccgtgtcgaagcgcaaggcatccaccggg
cgcaatccgcgcactggcgaacccatgacgatcaaggcgtcgagccagcccaagttcaag
gcgggcaaggtgctcaaggactcgctcaactaa
DBGET
integrated database retrieval system
