KEGG   Sphingomonas radiodurans: LLW23_17215
Entry
LLW23_17215       CDS       T08717                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
srad  Sphingomonas radiodurans
Brite
KEGG Orthology (KO) [BR:srad00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:srad02048]
    LLW23_17215 (hsdR)
Enzymes [BR:srad01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LLW23_17215 (hsdR)
Prokaryotic defense system [BR:srad02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LLW23_17215 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 DEAD DUF4145 Helicase_C HSDR_N SLFN-g3_helicase PhoH
Other DBs
NCBI-ProteinID: WBH18380
LinkDB
Position
complement(3615410..3618799)
AA seq 1129 aa
MGDVLSNFGFLEAHSPQLTKLGALAERYFASDPPTALVKLRQFAEFIAKDVAARHALLSG
GAATFDDVLRTLRARSVLPREMADLFFHLKQIGNVAAHEDRGTASEALTSLKIARAIGVW
FHQTYETAPSFKPGAFIPPTPPADATTALRLELEALRKVVASGADAEAKARLAAQQAEAE
RTLLAEQASREAKDRAFWEGYAAETEAALRAAEQSLASTQAQAMAAPPQQLDLLARIGAE
RAEQAELDEPTTRVIIDEQLRNAGWIVDSVVLRHAAGARPEYGKSMAIAEWPTRSGPVDY
ALFVDGRCVGLVEAKRQVRDVPGRIGQGKRYARDITLTLDELPSGGPWADGDDRFRVPLV
FATNGRPYIKQLATKSGIWFWDARTRSAPRALSEWFSPRDLTEKLEQRICEDTQIVADRE
LGVTGLRPYQKEAIEAVEEAVARGQDHILLAMATGTGKTRLAIALMYELLRTQRFRRILF
LVDRNALGRQTLDAMSTTDTNGFYKFDQVFPVADMACKFPEATDRVQVATVQAMVRRVFD
DPSADRPTPGTYDLIIVDEAHRGYTLDAELREDDLGFRDLDDYLSAYRRVLDYFDAKKVA
LTATPALHTREIFGPPVFRYGYRQAVIDGFLIDHRPPRRITTALSQTGISFDQGEEVNIF
DPRTGQIDLFDLEDQVDFEIAQFNKKVYTRAFNRAVAEAIAAECPPDQPGKTLLFAARDD
HADILIEELRAALIADYGPQPHDLVEKITGSIDKPLDRIKAFKNDPRPKYVVTVDLLTTG
IDVPAITNLVFVRRVNSRILYDQMIGRATRRCDEIGKEYFRIFDAVDINANLQDVTDMRP
VVVDPGLTFATLVGDIERASSDEDRAFVRDQIVVKLRQRTKYISEDRREALETVLGPLGA
LADRLKDATPAETIALFRQHPSLATVLDAANPAGKRDGIYISEHDDELVSVEDNFGEKAT
PSDYIESFEAYVRANMNAVPAMIAATQRPRELTRKELKELAILLDGKGFSEAALRRAYGS
ARNADIAAHIIGFVRQAALGDPLVPYEARVDNGVHRIIASRAWSAKQKQWLNRIGRVLRA
QPVGDPEILSDPLFAQAGGFAVVDREFDSGLGEVLKDLNAAIWGSGIAA
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgggggacgtgctcagcaattttggctttttggaagcgcatagcccccagctgacaaaa
ttaggcgccctggcagagcgttacttcgccagcgatcctcctaccgcattggtcaaatta
cgccagtttgccgagttcattgccaaggatgtcgccgcccgccacgcactattatcgggc
ggcgcggcaaccttcgacgatgtgctgcggacgctccgggctcgttcggtactgccgcgc
gagatggccgacctgttcttccacctcaagcagatcggcaacgtcgcggcgcatgaggac
cgagggacggcttctgaggcgctgacctccctgaaaatagcacgtgcgatcggagtctgg
tttcatcagacttatgagacggcaccttcgttcaagccgggcgcgttcatcccgcccacc
ccgccggcggacgcgaccaccgcgcttcgtctcgaactggaagcgctccgcaaagtcgta
gccagcggggcggacgctgaggcgaaggcccgtcttgcggctcagcaagccgaggccgag
cgaacgctcctggcagagcaggcgagccgggaggccaaggaccgagccttctgggagggt
tatgccgccgagaccgaagccgcgcttcgcgcagcggagcaatcgctggcatcaacccaa
gcgcaagcgatggcggccccgccgcagcagctggacctgcttgcccgcatcggcgcggaa
cgtgcagagcaagccgagctcgatgagccgaccactcgcgtcatcatcgatgagcagctg
cggaacgcggggtggatcgtcgacagcgtcgtcctgcgccacgccgccggggcgagaccc
gagtacggaaaatcgatggccattgcagaatggccgacaaggagcggtcctgttgattac
gctctattcgtggatggccgttgtgttggcttggttgaggcaaagcgacaggtccgcgat
gtgcctggccgaattggacagggtaagcgctatgctcgcgacatcacgctcacgctagat
gaactcccgtctggaggaccgtgggcggacggcgacgaccgcttccgtgtgccgctcgtc
ttcgcgaccaacggccgcccgtatataaagcaactcgctaccaagtcggggatctggttc
tgggacgcacgcactcgctccgcaccgcgcgcgttaagcgaatggttcagcccgcgggat
ctcaccgagaagcttgaacagcggatttgcgaggacacgcagatcgtcgccgatcgagag
ctcggggtcacgggtttgcgcccctatcagaaggaagcgatcgaggcggtagaagaggcg
gttgcgcgggggcaggaccatattctgctggcgatggcgaccggcaccggaaagacgcgg
ctcgccatcgcgctgatgtacgagctgcttcggacgcagcgctttcgccgcattctcttc
ctcgtcgatcgcaacgcgctggggcgccagacgctcgacgcgatgagcacgaccgacacc
aacggcttctacaagttcgaccaagtcttccccgtcgccgacatggcatgcaagttcccg
gaggcgaccgaccgtgtgcaggtcgcaaccgtgcaggccatggtccgtcgcgtctttgat
gaccccagcgcggatcggccgacgccgggaacctacgacctgatcatcgtcgacgaggcc
catcgcggctacacgctcgacgccgaactgcgtgaggacgacctcggcttccgtgacctc
gacgattatctgtctgcctatcgccgcgtcctcgactattttgatgcgaagaaggtcgcc
ctgaccgcgaccccggcgctccacacccgcgagatattcggcccgccggtatttcggtac
ggctaccggcaagcggtgatcgacggcttcctgatcgaccatcgcccgccgcgccgcatt
accactgcgctcagccagaccggcatcagctttgaccagggcgaggaggtgaacatcttc
gacccgcgcaccgggcagatcgacctgtttgatctcgaggatcaggtcgacttcgaaatc
gcccagttcaacaagaaggtctacacccgcgccttcaaccgcgcggtggccgaggcaatt
gccgccgagtgcccgcctgaccagcccggcaagacgctactgttcgccgcccgcgacgat
catgcggatatactcatcgaagaacttcgcgccgcactgattgccgactatggcccgcag
ccacacgacttggttgaaaagatcactggatcgatcgacaagccgctcgaccggatcaag
gcattcaagaacgatccgcgccccaagtacgtcgtcacggttgatctgctgaccaccggc
attgacgtgcccgcgatcaccaacttggtgttcgtacgccgggtgaacagccgcatcctc
tacgaccagatgattggccgcgcgacgcggcggtgtgatgagatcggcaaggagtatttc
cgcatctttgatgcggtcgacatcaatgccaacctgcaggacgtcaccgacatgcgccct
gtggtggtcgatcccggcctgaccttcgcgacgttggtcggcgacatcgagcgggcatcg
agcgacgaggaccgcgcgttcgtccgcgaccagatcgtcgtcaagctgcgccagcgcacc
aaatatatcagcgaggatcgccgtgaggcgctggagactgtgctcggcccgctcggcgcg
ctggccgaccggctcaaggatgcgacgcccgccgagacgatcgcgctgttccgccaacac
ccgtcgctcgcgacagtgctcgacgcggcgaatcctgcgggcaagcgcgacggcatctac
atctccgagcatgacgacgagctcgtctcggtcgaggacaatttcggcgagaaggcgaca
ccgagcgattatatcgaaagcttcgaggcctatgtccgcgcgaatatgaatgcggtgccg
gcgatgatcgccgccacccagcgcccgcgcgagctaacccgcaaggagttgaaggagctg
gcaatcctgcttgacggcaagggcttctccgaggcagcgctccgccgcgcctatggcagc
gcgcgcaatgccgatatcgccgcgcacatcattggttttgttcgccaggcggcgctcggc
gatccgctcgtcccctacgaggctcgcgtcgacaacggcgtccatcggatcatcgcaagc
cgcgcttggtccgccaagcagaagcagtggctcaaccgcatcggccgcgtgctgcgcgcg
cagcccgtcggcgatcccgagatcctgtccgatccactgtttgcgcaggccggcggcttt
gcggtggtcgaccgcgagttcgactccgggctaggggaagtactcaaggatctgaacgcc
gcgatctggggcagcggcatcgccgcgtga

DBGET integrated database retrieval system