Staphylococcus ratti: LN051_02360
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Entry
LN051_02360 CDS
T08246
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
srai
Staphylococcus ratti
Pathway
srai00630
Glyoxylate and dicarboxylate metabolism
srai00680
Methane metabolism
srai01100
Metabolic pathways
srai01120
Microbial metabolism in diverse environments
srai01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LN051_02360 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
LN051_02360 (fdhF)
Enzymes [BR:
srai01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LN051_02360 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer4
NADH-G_4Fe-4S_3
Fer2_4
Fer4_7
Fer4_6
Fer4_10
Fer4_21
Fer4_2
Fer4_8
Fer4_15
Fer4_9
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
UEX90530
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All DBs
Position
548017..550953
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AA seq
978 aa
AA seq
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MQEHLIVTLDGNDYLVEPGKNLLELIKEQNTFVPSICYNESLGPIQTCDTCVVEIDGKIE
RACGTTIDRSMVVNTQGEAVQTSQKEALDRILEKHQLYCTVCDYNNGNCEIHNTMDEWGL
EHQTYAYKPKPYDVDFGPFYRYDPNQCILCGRCVEVCQDVQVNETLTIDWEREQPRVIWD
NDVSINESSCVGCGQCATVCPCNAMMENNMVGNAGYMTDIEPGSLASMIDLTKKAETGYG
PLFAVSDSEAAMREERIKKTKTVCTYCGVGCSFEVWTKDREILKVQPSHDSPANKISSCV
KGKFGWDYVNSEERLTKPLIRRGDQFEEVEWEEAIPYVAQRMNDIKNEYGSNALSFISSS
KATNEESYLMQKMARQVFGTNNIDNCSRYCQAPATKGLFRTVGHGGDSGSIDDIGNAEMV
ITIGTNTAEAHPVIASRIKRAHKLFGQKLHVFDIRKHEMAQRADAFYQPYPGTDLVWLSA
VTKYIIDNDWHDKAFIEKWVDHAGEYYQSLEPYTMEFAEETTGIPKERLMDLAKEIVSVD
TVVVCWAMGVTQQETGSDTSTAISNMLLATGNYMKPGAGSYPLRGHNNVQGCSDFGSMPD
KFPGYEGVADDAVRARYEKAWGVQLPSEPGYDNHQMMDHIHAGDVHSLFILGEDTGIVDS
NINYVQAALEKVDFLVVQDEFLTFTAEYADVVLPASPSLEKDGTFTNTERRFQRLYQALE
PLGDSKPDWQITQLIAKALGFDWNYTHPSEIMDEASDLAPLFAGVKYERLEGYNSLQWPV
EADGTDSPLLFTERFNFDNGKAKFFPLEFDNFYKINEEYDLHVNNGRVLEHFHEGNMTYK
VPGLKYKMPSAFIEISPELAEERGIHEGAAVRLTSETGEAKGHVHITDRVKGKQIYLPLN
DNNESAINYLTSSVTDPETHTPAYKSTCCRMEVLSKRGKSPINPTNFRNQQRKPQYSVAI
EKKWERPDYVFPGDQVMK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacatcttatcgtaacattagatggtaatgattatcttgtagaaccaggtaaa
aatttacttgagttgattaaagagcaaaacaccttcgtaccttctatttgttataacgaa
tcattaggacctattcaaacatgtgatacgtgtgtggttgaaatagatggcaaaattgaa
cgtgcatgtggcacaacaattgatcgttcaatggtcgttaatacacaaggtgaagctgta
caaacgagtcagaaagaagcgttagatcgaattttagaaaagcatcaactgtattgtaca
gtatgtgactacaataacggcaactgtgaaatccataatacaatggatgaatggggcctt
gaacatcaaacgtatgcgtataaaccaaaaccttatgatgtagattttggtccgttttat
cgttatgatccaaatcaatgtattttatgtggacgttgtgtggaagtttgtcaagacgtc
caagtcaatgaaacattaacgattgattgggaacgtgaacaaccacgtgtaatttgggat
aacgacgtttctattaatgaatcttcttgtgtaggctgtgggcaatgtgcaaccgtttgt
ccatgtaatgccatgatggaaaataatatggttggtaatgcaggttacatgacagacatc
gaaccaggctcattagcatcaatgattgatttaacgaaaaaagccgaaacaggttatggt
ccgttatttgcagtctctgattcagaagcagcaatgcgtgaagaacgtattaagaaaaca
aaaacagtttgtacttattgtggtgtaggttgtagttttgaagtttggactaaggatcgc
gaaattcttaaagtacaaccttctcatgattcacctgccaataaaatttcttcttgtgta
aaaggaaagtttggttgggactatgtgaattcagaagaacgcctcacaaaaccgttaatt
cgacgtggtgatcaatttgaagaagttgaatgggaagaagccattccatatgttgctcaa
cgtatgaatgatattaaaaatgaatatggttcaaatgcactttcatttatttcatcttca
aaagcaacgaacgaagaatcttacttaatgcaaaaaatggcacgccaagtttttgggacg
aataatatcgacaattgctcgcgttattgtcaagcacctgcgacgaaaggtttattccgt
acggtaggacacggtggagattctggatcaatcgatgacattggtaatgcagagatggtc
attacaattggtacaaatactgcagaggcacatccggttattgcatcacgcattaaacgt
gctcataaactttttggtcaaaaattgcatgtgtttgatatccgtaaacatgaaatggca
caacgtgcagatgcattttatcaaccgtatccaggaacagatttggtttggttatctgca
gtgacaaaatatattattgataacgattggcatgacaaagcttttatcgaaaagtgggtt
gaccatgctggagaatattatcaatcattagaaccgtatacgatggaatttgctgaagaa
acgacaggcattccaaaagagcgattaatggacttagcaaaagaaattgttagtgtagat
accgtagttgtatgttgggcgatgggcgtgacacaacaagaaacaggttcagatacgagc
acggctatttcaaatatgttgctcgctacaggtaactacatgaagccaggtgcaggctct
tatccattacgtggacataacaatgttcaagggtgttctgactttggtagtatgccggat
aaattcccaggctatgaaggtgtagcggatgacgctgtacgtgcacgttatgaaaaagca
tggggcgtccaattgccaagtgaaccagggtatgacaaccatcaaatgatggatcatata
catgctggagatgtgcacagtctctttattttaggagaagatacaggcattgttgactcg
aatattaactatgttcaagctgctcttgaaaaagtggatttcttagtggttcaagatgag
tttttgacgtttacagctgaatatgccgatgtcgtgttaccagcaagtccatctcttgaa
aaagatggtacgtttacaaatacggaacgccgttttcaacgtttatatcaagctttagag
ccactaggggattctaaacccgattggcaaattacacaattaatcgctaaagcgctcggt
tttgattggaattacacacatccatctgaaattatggatgaagcttctgatctagcaccg
ctatttgcaggtgtgaagtacgaacgtcttgaaggatacaatagcttacaatggcctgta
gaagctgatggcacggattctccattactatttacagaaagatttaattttgacaatggt
aaagctaaatttttcccattagaatttgataatttctataaaattaatgaagaatacgat
ttacatgtcaataatgggcgcgtacttgaacatttccatgaagggaatatgacgtataaa
gtaccaggccttaaatataaaatgccgtcagcattcattgaaatttcgccagaacttgct
gaagaacgaggcatccatgaaggtgctgctgtaagattaacttctgaaacaggtgaagcg
aaaggtcacgttcatattacagatcgtgtgaaggggaaacaaatttatttaccgttaaat
gacaataatgaatcagcaattaattatcttacgagtagtgtgactgacccagaaacacat
acaccagcgtacaaatcaacgtgctgtcgtatggaagttttaagcaagcgtggtaaatct
ccaataaatcctactaacttccgtaatcaacagcgtaaaccacagtatagcgtagcaatt
gagaaaaaatgggaaagaccagattatgtcttcccaggggatcaggtgatgaaataa
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