Staphylococcus ratti: LN051_03180
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Entry
LN051_03180 CDS
T08246
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
srai
Staphylococcus ratti
Pathway
srai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN051_03180 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srai03021
]
LN051_03180 (rho)
03019 Messenger RNA biogenesis [BR:
srai03019
]
LN051_03180 (rho)
Transcription machinery [BR:
srai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LN051_03180 (rho)
Messenger RNA biogenesis [BR:
srai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LN051_03180 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
Mor
AAA_24
ATPase_2
AAA_19
YhdX
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UEX90676
UniProt:
A0ABY3PEC7
LinkDB
All DBs
Position
698264..699580
Genome browser
AA seq
438 aa
AA seq
DB search
MATRERTSPQYESFHELYKNHTTKALTEKAKSLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQQDGYGFLRTVNYSKGEKDIYISASQIRRFEIKLGDKVTGKVRQPKENEK
YYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPEERIKLETDPEKYSTRVMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAIVKNKPNAKLFILLVGERPEEVTDIERSVEEAEVVHST
FDEHPRHHVKVAELLLERAKRLVEIGEDVIVLMDSITRLARAYNLVVPPSGRTLSGGLDP
ASLHGPKTFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRRLSE
RRIFPAIDITRSSTRKEELLIPKNELESLWQLRNMFSNTPDFAERFIRRLKKTKTNEAFF
EELKKSAIESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcgactagggaaagaacgtcaccgcaatatgagtcttttcatgaattgtataaaaat
cacactacaaaagctttgactgaaaaagcgaagtctttaaagttaacaaattatagtaag
ttgaataagaaagaactcgttcttgccataatggaagcacaaatggaaaaagacgggaac
tactatatggagggtattttagatgatatccaacaagatggctacggctttttaagaacg
gttaactattctaaaggtgaaaaagatatttatatatctgcttctcaaattaggcgtttt
gaaattaaattgggtgataaagtaactggaaaagtaaggcaacccaaagaaaacgaaaaa
tattatggattattacaagttgactttgtcaatgaccacaatgctgaagaagtcaaaaaa
cgaccacatttccaagcgttaacacctctttatcccgaagaacgtatcaaattagaaaca
gaccccgaaaaatactccacacgtgtcatggatttagtgacgccaatcggattaggacag
cgtggcttaatcgttgctccgcctaaagcgggtaaaacctctttactcaaagaaattgcg
aatgcgattgtaaaaaacaagccgaatgctaaattatttatccttctcgttggggaaaga
cccgaagaagtaacggatatagaacgttcagtagaagaagcggaagtcgtccactctact
tttgatgaacacccaagacatcacgttaaagtagcagaactgttgttagaacgtgcgaag
cgcttagttgaaattggggaagacgtaatagtactgatggattccattacacgtcttgca
cgtgcatataacttagtagtgccacctagtggcagaacattatctggtggtttagatcct
gcctctttacacggtcctaaaactttttttggtgctgcacgtaatatagaagctggtggc
agtcttacaattttagctacagcacttgtagatacaggttcgcgtatggacgatatgatt
tacgaagaatttaaaggtactggaaatatggagctgcatttagatagacgtttatcagaa
cgccgtatttttccagcaattgacattacacgtagttcaacgcgaaaagaagaattgctc
attcctaaaaatgagcttgaaagtttatggcaattacgcaatatgttttcaaatacgccg
gatttcgcagagcgctttatccgtagattaaagaaaacgaaaaccaatgaagcctttttt
gaagaattgaaaaaaagtgctattgaaagtactaaaacaggcaagccgattatttaa
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