Staphylococcus ratti: LN051_03395
Help
Entry
LN051_03395 CDS
T08246
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
srai
Staphylococcus ratti
Pathway
srai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN051_03395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srai03019
]
LN051_03395
03009 Ribosome biogenesis [BR:
srai03009
]
LN051_03395
Enzymes [BR:
srai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LN051_03395
Messenger RNA biogenesis [BR:
srai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LN051_03395
Ribosome biogenesis [BR:
srai03009
]
Prokaryotic type
rRNA helicases
LN051_03395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
SUa-2TM
CMS1
AAA_30
AAA_19
Cas3-like_C_2
DUF3744
Motif
Other DBs
NCBI-ProteinID:
UEX90715
LinkDB
All DBs
Position
734630..736117
Genome browser
AA seq
495 aa
AA seq
DB search
MQNFTSLGVSEKTAETLESMGFTEPTPIQKDSIPSALKNLDILGQAQTGTGKTGAFGIPL
IEKVVGQEGVRALILAPTRELAMQVAEQLREFSRGQKVQVVTVFGGMPIDRQIKSLKRGP
QIVVGTPGRVIDHLNRRTLKTQHIETLILDEADEMMNMGFIDDMRYIMDKLPSDNRQTML
FSATMPKAIQELVQKFMKSPQIIKTMNNELSDPQIDEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTGALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKQGMAVTFVNPIEMDYIRQIEQANR
RQMRALRPPHRKEVLRAREEEIKSKVENWMAATKEPRVENIAQQLLEVYDHTELVTALLQ
ELVESNDEVEVQLTFEKPLARKSRQPKNNRKGGGAKRYSKSRRGNKSNFNKKGNTHKEKR
DSKVKKGRTFADHQK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttacaagcttaggtgtttcagaaaaaacagctgaaacattagagtcgatg
ggatttacggaacctacaccgatacaaaaggatagcattccatctgctcttaaaaattta
gatattttgggccaagcacaaacgggcacaggaaaaacgggtgcatttggtatcccatta
attgaaaaagtagtaggccaagaaggtgtccgcgcacttatcttagcaccgacacgtgaa
cttgcaatgcaagtcgcagaacaattacgtgaatttagccgtggacaaaaagttcaagtc
gtgactgtatttgggggtatgccgattgaccgccaaattaaatctttaaagcgtggaccg
caaattgtagtagggacacctggacgtgtgattgatcatttgaatcgtcgtactttaaaa
acacaacatattgaaacgttaatattagacgaagcagatgaaatgatgaatatgggattc
attgatgatatgcgttacattatggataaattgccatctgacaatcgtcaaacaatgctt
ttttcggcaacgatgccaaaagcaattcaagagttagttcaaaaatttatgaaatcacca
caaattattaaaacgatgaataatgaactttctgaccctcaaattgatgaattttataca
attgttaaagaacttgaaaagtttgatacgtttacaaacttcttagacgttcaccaacct
gaacttgcaattgtatttggacgtacgaaacgtcgtgtggatgaacttacaggtgcatta
ctttcaaaaggttataaagcagaagggttgcacggtgacattacacaagctaaacgtcta
gaagtacttaaaaaattcaaaaatgatcaaattgacattttagtagcaacagacgtcgct
gcacgtggtttagatatttctggtgtaagccacgtttataattttgacattcctcaagat
actgaaagctatacgcaccgtattggacgtacgggccgtgcgggtaaacaaggtatggca
gtaacatttgttaacccaattgaaatggactatatccgtcaaattgaacaagcgaaccgt
cgccaaatgcgtgcattacgtccgccgcaccgtaaagaagtactgcgtgcacgtgaagaa
gaaattaaatctaaagtagaaaattggatggcagcgacgaaagagccgcgtgttgaaaac
atcgcgcaacaattattagaagtatacgaccatactgaattagtcactgcacttttacaa
gaattagtagaatcaaacgatgaagtcgaagtgcaacttacatttgaaaagccgcttgca
cgtaaaagtcgtcaaccgaaaaacaaccgtaaaggtggcggtgcaaagcgttattctaag
tcgcgtcgtggtaacaaatcaaacttcaataaaaaaggcaacacacataaagaaaaacgt
gattctaaagtgaaaaaaggccgaacatttgcagatcatcaaaaataa
DBGET
integrated database retrieval system
