KEGG   Staphylococcus ratti: LN051_03865
Entry
LN051_03865       CDS       T08246                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
srai  Staphylococcus ratti
Pathway
srai03030  DNA replication
srai03430  Mismatch repair
srai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:srai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LN051_03865
   03430 Mismatch repair
    LN051_03865
   03440 Homologous recombination
    LN051_03865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:srai03032]
    LN051_03865
   03400 DNA repair and recombination proteins [BR:srai03400]
    LN051_03865
Enzymes [BR:srai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LN051_03865
DNA replication proteins [BR:srai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LN051_03865
DNA repair and recombination proteins [BR:srai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LN051_03865
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 DEDDh_C
Other DBs
NCBI-ProteinID: UEX90799
UniProt: A0ABY3PEY2
LinkDB
Position
complement(830642..831202)
AA seq 186 aa
MAHPSYVALDFETANYKRTSICSVGMVKVVNHELTETFYTLVNPKDFFATKNIAIHGIHS
EDVQNAPDFSYVYPYMLQFIESLPVVAHNAAFDMSVLHASIKAHQFETPDLTYFCSYQLS
KKTVATQRNGLKHMMQYYNLDFHGHHDALNDAKACAMITYRLLQHYPSLESVLRVYGKNL
QDKDVL
NT seq 561 nt   +upstreamnt  +downstreamnt
atggcacatcctagttatgtcgctttagattttgaaactgccaattataaacgaacgagt
atctgctctgttggtatggttaaagttgtcaatcatgaacttactgaaaccttttataca
ttggtcaatccgaaagacttttttgccactaaaaacatagccattcatggtattcattct
gaggatgtgcaaaatgccccagatttcagttatgtttacccttatatgctccaattcatc
gaatcattacctgtcgtagcacataatgctgcgtttgacatgtctgttttacatgcaagt
ataaaagcccatcaattcgagacaccggacttaacttatttttgttcttatcaactttcc
aaaaaaacagtggcgacgcaacgaaatggccttaaacatatgatgcaatattataatttg
gattttcacggacatcatgacgctttaaatgatgccaaagcatgtgcgatgattacatat
cgcttactccaacattatccaagtttagaaagcgtattgcgtgtttatggcaagaattta
caagataaagatgttctataa

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