Staphylococcus ratti: LN051_04995
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Entry
LN051_04995 CDS
T08246
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
srai
Staphylococcus ratti
Pathway
srai03030
DNA replication
srai03430
Mismatch repair
srai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LN051_04995
03430 Mismatch repair
LN051_04995
03440 Homologous recombination
LN051_04995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srai03032
]
LN051_04995
03400 DNA repair and recombination proteins [BR:
srai03400
]
LN051_04995
Enzymes [BR:
srai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LN051_04995
DNA replication proteins [BR:
srai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LN051_04995
DNA repair and recombination proteins [BR:
srai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LN051_04995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UEX90976
LinkDB
All DBs
Position
1025833..1029027
Genome browser
AA seq
1064 aa
AA seq
DB search
MVAHLNIHTSYDLLNSSIRIERIVSKAKQEGYAAIAITDLNVMYGVPQFFDACLKANIQP
ILGLTLYVTDDLVEKEAVLLAKNNDGLKRLFKLSSDINTKRLRHINIYDLPEYIEDTVVI
FKALTHETATWLDNVPKSTSVYVDHLSNISTIPKVWIESAFYESPSDADTVEVLGAIRDN
TKVNLVEQSISKQQHFKTIDELTHMNLQQQWLEATDEIAQLCEATLTYHQPLLPEFSTPQ
GMTSDDYLWEQLQSAMKKKQLNQNAYQQRVVHEFNTIKAMGYSDYFLIVSDLINYAKNNG
VMVGPGRGSSAGSLVSYLLNITTIDPLKYDLLFERFLNPERVTMPDIDIDFEDTQREKVI
HYVQEKYGAFKVAGIVTFGHLLAKAVARDVGRVMGFDEATLSEASKLIPSKLGVTLKDAY
ATEAFKQFVHRNHRHEQWFELCKKLEGLPRNTSTHAAGVIVNDQPLYETIPLTQGETGVL
TQWTMTEAERIGLLKIDFLGLRNLTIIHQVMKQVQKDTGVAIDIERIPFNDAAVFQLLSK
GDTTGIFQLESEGVRRVLQKLKPQHFEDIVAVTSLYRPGPMEEIPTYIKRRHNPSEVQYL
HPDLEPILKRTYGVIIYQEQIMQIASRFAGFSYGEADILRRAMSKKNRAVLENERQHFIE
GASKKSYSKALSKEIFDLILKFADYGFPRAHAVSYSKIAYIMTYLKVHYAPYFYANILSN
VVGNETKTAQIILEAKQQHIQINGPHINHSQWRYRAVKHQIYISLGAIKGIGYQSVQTIV
KERIENGAYKDFFDFCRRIPTRIRSRRLLEALILSGAMDCFKKNRATLLQSIDKVSDIQS
DLDQSFLEAFSTTKQEYQETEEMPEQQKSDYEKQYLGFYVSMHPAEKAFRAKQYLGVYPL
TTKAHNEPILVMLEEIKVIRTKKGQKMAFVVFNDGLRQIDGVIFPKLYQTVESSLDTQSF
YVIEGKFEQRNNQVQIVVNQLNTLKVYEQHKLGFANQIVTREHLSEAKQQLLKRTVVQQD
NQQNILSVLFFDDKTNATQTLGYIQRDDVESFIQDFNPENIRLL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggttgcacatttaaatatccatacatcatatgatttgctcaactcaagtattagaatc
gaacggatcgtttcaaaagcaaagcaagaaggttatgcagccattgcaattaccgacctt
aacgtgatgtatggcgtgcctcaattttttgatgcatgtttaaaagcaaatattcaacct
attttagggctgacgctctatgtaacagacgatttagtagagaaagaagctgtgctttta
gcaaaaaataacgacgggttaaagcgtcttttcaaattgtcttcagatattaatacaaag
cgtctacgtcatattaatatctatgatttgcccgaatacatagaagatacagtagtgata
tttaaagcattgacacatgaaacagccacatggcttgataacgttccgaaatctacctct
gtttatgtagaccacctttccaatattagtactattccaaaagtatggattgaatccgca
ttttatgaaagtccgagtgatgcggatacggtagaagtgttaggtgcgattcgggataat
acgaaagtgaatttagtggaacaatcaatatctaagcaacaacattttaaaacaatagat
gagcttacccatatgaatcttcagcaacaatggcttgaagcgacggatgaaatcgctcaa
ctatgcgaagcgacattaacataccatcaaccactattgcctgaattcagcacacctcaa
ggtatgacttcagacgattatttatgggaacagcttcaatctgcaatgaaaaaaaaacaa
ctcaaccaaaatgcatatcaacaacgtgtggtgcatgaattcaatacgattaaagcgatg
gggtatagcgactactttttaatcgttagtgatttgattaattatgctaaaaataacggt
gttatggttgggccaggtcgtggttcttcagcaggttctttagtcagttatttattaaac
attacgacgattgatccattgaaatatgatttgctatttgaacgttttttaaatccagaa
cgtgtgactatgccagatatagatattgattttgaagacactcaaagagaaaaagtcatt
cactatgtgcaagaaaaatatggtgcttttaaagttgcaggtattgttacattcggccat
ttacttgctaaagctgttgcgcgtgatgtcggacgtgttatgggctttgacgaagcaaca
ttaagtgaagcatcaaaacttattccaagtaaattaggtgtcacgttaaaagatgcctat
gcaacagaggcttttaaacaatttgtacatcgaaaccacagacatgagcagtggtttgaa
ttatgtaaaaaacttgagggactacctcgtaatacttcgacgcacgcggcaggtgttatc
gtcaatgatcaaccattatatgaaacgatccctttaacccaaggtgaaacaggtgtttta
acacaatggacaatgacagaagcggagcgaattggactattaaaaatagactttttaggt
ttacgtaacttaacaattattcaccaagtgatgaaacaagttcaaaaagatacaggcgtt
gctattgatatagaacgtattccttttaacgatgcagcggtgtttcaattgttatctaaa
ggagatacaacaggcattttccaacttgagtcagaaggtgtacgtcgtgtacttcaaaaa
ttaaaacctcagcattttgaggatattgtcgcggtcacctcattgtatcgtcctggtcca
atggaagaaataccgacatatataaaacgaagacataacccttctgaagttcaatattta
catccggacttggagccgatattaaaacggacatatggtgtcattatttatcaagagcaa
attatgcaaatcgcaagtcgcttcgcaggctttagctatggtgaagctgacattttaaga
cgtgcaatgagtaagaaaaaccgtgcagttttggaaaatgaacgccaacattttattgaa
ggggcaagtaaaaaaagttactcaaaagcattgagtaaagaaatttttgatttgatttta
aaatttgcggattacggttttcctagagcgcatgctgttagttattctaaaattgcttac
atcatgacttacttaaaagtacactatgcaccttatttttatgcgaatattttaagcaat
gtggtagggaacgaaacgaaaacggcacaaattattttggaggccaagcaacaacacatt
caaattaacggacctcatattaatcatagccaatggcgctatcgtgcagtaaaacatcaa
atttacatctcgttaggggcaataaagggtattggctatcaaagtgttcaaacaatcgtt
aaagagcgaatagaaaatggtgcttataaagatttctttgatttttgtcggcgcatacct
acacgtatccgttctaggagattattggaagcgcttattctttcaggagcaatggattgt
tttaaaaagaaccgagcgacccttttgcaatctattgataaagtaagtgatatacaatct
gaccttgatcaaagctttttagaagctttttccacaacgaaacaagaatatcaagaaact
gaagaaatgcctgaacagcagaaatcggattatgaaaaacaatatttaggcttttacgta
tcgatgcatccagcagaaaaagcatttcgcgcaaaacagtatcttggtgtttatccactt
acaacgaaagcccataacgaacctattttggtgatgttggaagagattaaagtcattcgt
actaaaaaagggcaaaagatggcgtttgtagtattcaacgatggtttgcgtcaaattgat
ggcgttatatttccaaaactatatcaaacggtggagtcctctctagatacacaaagtttc
tatgtcattgaaggaaaatttgagcaacgtaacaaccaagttcaaattgtcgtgaaccaa
ctgaatactttaaaagtgtatgaacaacacaagttagggtttgccaatcaaatcgtcacg
cgtgaacacttatctgaagctaaacaacaattgttaaagcgcacagtggtgcaacaagac
aatcaacaaaatattttaagtgtcttgtttttcgatgataaaaccaatgcgactcaaacg
cttggttatattcagcgagatgatgttgaaagttttattcaagactttaatcctgaaaat
ataagattgttataa
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