Staphylococcus ratti: LN051_05635
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Entry
LN051_05635 CDS
T08246
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
srai
Staphylococcus ratti
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srai03019
]
LN051_05635
03009 Ribosome biogenesis [BR:
srai03009
]
LN051_05635
Enzymes [BR:
srai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LN051_05635
Messenger RNA biogenesis [BR:
srai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LN051_05635
Ribosome biogenesis [BR:
srai03009
]
Prokaryotic type
rRNA helicases
LN051_05635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
UEX89067
LinkDB
All DBs
Position
1161780..1163120
Genome browser
AA seq
446 aa
AA seq
DB search
MPKHPFGHFNFDPSLISAIDELNFQQPTDVQQRVIPKLLKRVNLIGQSQTGTGKSHSFLL
PIFQLIDASIVEPQAIVLAPTRELATQLYHAALQLASHKEGIKVSLFIGGTDFEKDKQKT
TQQPQLVIGTPTRINDLAKSGALHVHLAKQLIIDEADLMIDLGLIQEVDQVAARLDKEAK
TAVFSATIPKSLHPFLNKYLENPEFVEVKTEQKNKKNITFYLIPTRGTEKLEKTIELIDT
INPYLGIIFCNSRDNANTLAENLNHKGIQVGMIHGGLSPRERKQQMKRIRNLDFQYVIAS
DLASRGIDIEGVSHVINYDVPLDIDFFTHRVGRTGRGNYKGIAITLYQPDEEYLIQQIEQ
KGYHFENVDIKNGELKPIKAHNTRRLRQKQDDHITQQVKNKVKRNNKKKVKPGYKKKFKQ
EVENLKRQEKRQHSRRKKRLDRKNKK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacacccatttggtcattttaattttgacccaagtttaatttcagcaatagat
gaattaaactttcaacaaccgacagacgttcaacaacgtgtcattcctaaattattaaaa
agagtgaatttaatagggcaatctcaaacagggacagggaaatcacattcatttttactt
ccaatttttcaattaatcgatgcatcgatagtagagccgcaagccattgttcttgcgcct
actagggaattagcgacacaattgtatcacgctgcgttacaactggcttcacataaagaa
gggataaaagtaagcttatttattggggggacagattttgaaaaagacaaacaaaaaaca
acccaacaaccgcaacttgttattggtacgcctacacgtatcaatgatttagcaaaatct
ggcgctttacatgtacatcttgctaagcaacttattatagatgaagcagatttaatgatt
gatttaggcttaatacaagaagtggaccaagttgctgcacgattagataaagaagctaaa
acagcggtatttagtgctaccattcctaaatcattgcatccatttttaaataaatattta
gaaaatcctgaatttgtagaagttaaaactgaacaaaaaaacaagaaaaatattacattc
tatttaatacctacaagaggtacagaaaagttagaaaaaactatcgaactgatcgataca
atcaatccttatttgggtattatattctgtaatagtcgcgacaacgcaaatacgttagct
gaaaacttgaatcataaagggattcaagtcggaatgattcatggaggcttatcacctcgt
gaacgcaaacagcaaatgaagcgcatccgaaatttagattttcaatatgtcattgcgagt
gatttagcttctcgaggtattgatatcgaaggtgtaagtcacgtaatcaattatgatgta
ccgttagacattgatttctttacgcaccgtgtgggtcgtactggtagaggtaactataaa
gggattgccatcacgctctatcaacctgatgaagaatatctgattcaacaaatcgaacaa
aaaggttatcattttgaaaatgtagatattaaaaatggtgagttaaagcctattaaagca
cataatacacgtcgtttaagacaaaaacaagatgatcatattacgcaacaagttaaaaat
aaagttaaacgtaataataagaaaaaagtaaaaccgggttacaaaaagaaatttaagcaa
gaggtagaaaatttaaaacgacaagaaaaacgacaacatagtagacgtaaaaagcgtctt
gatcggaaaaataaaaaataa
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