Staphylococcus ratti: LN051_05830
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Entry
LN051_05830 CDS
T08246
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
srai
Staphylococcus ratti
Pathway
srai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LN051_05830 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srai03400
]
LN051_05830 (xseA)
Enzymes [BR:
srai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LN051_05830 (xseA)
DNA repair and recombination proteins [BR:
srai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LN051_05830 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UEX89104
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All DBs
Position
1196757..1198103
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AA seq
448 aa
AA seq
DB search
MTTYLTVSALTKYIKYKFDKDPHLQSVLIKGELSNFKKHSSGHLYFAIKDENSLINAMMF
KAQASKLDFVPKEGDQVLVEARVSVYERRGSYQIYVNQMQLDGIGYLYQKFEQLKTKLSK
EGYFDESHKKTIPKYPSKIAILTAQTGAAIRDIQNTLTSRYPLAEQIKISTLVQGEAAKA
DIIEKLRYADTLNVDTIIIGRGGGSIEDLWNFNEEEVVKAIYQCETPVISAVGHETDTTL
SDYVADVRAATPTQAAMIATPDKKELLQMIAQSRIFMTRFIKQYLKHARQYMTQYTSYYK
LKQPTLLYEQHVQKRDELDRMLHEAMKQRLLFERQKLIMMQQRFHLKHFYQYIVTQQEKN
SNLKKQLSKRMYAILKQKEQHLIQKVEILNNLSPTQTMLRGYSIVKRENEVITSRKQLSK
GDDIEIMMKDGSIDAIIEKVRCQNDVKK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttatttaactgtctctgcattaacgaaatacattaaatataaatttgataaa
gacccacatcttcaatctgttttgattaaaggtgaactttccaacttcaaaaaacatagt
agtggtcatctttattttgcgattaaagatgaaaacagcttaattaacgctatgatgttt
aaggcacaagcttcaaagttggatttcgtacctaaagaaggggatcaagttttagtcgaa
gcgcgcgtatctgtatatgagcgtagaggaagttatcaaatttatgtaaatcaaatgcaa
ttagacggtattggttatctttatcaaaaattcgaacaattaaaaacaaaactatcaaaa
gaaggatattttgacgaatcacataaaaaaactattcctaaatatccttctaaaattgca
attttaacagcacaaacaggtgcagccatccgtgatatacaaaacacactaacatcacgc
tatccactcgctgagcaaattaaaataagtacacttgttcaaggggaagccgcaaaagct
gatattattgaaaaattacgctatgcagacacgctaaacgtagatacgattattatcggt
cgtggtggaggatctatagaagatttatggaattttaatgaagaagaagttgtaaaagcc
atttatcaatgtgaaacacctgttatttctgctgtaggtcatgagacagatactacatta
agtgattatgtagcagatgtgcgcgctgcaacccctacacaagcagctatgattgcaacg
ccagacaaaaaagaactacttcaaatgattgcgcaaagtcgtatatttatgacgcgtttt
attaaacaataccttaaacatgcaagacaatatatgacgcaatatacgtcctattacaag
cttaaacaaccaacattattatatgagcaacatgttcaaaaaagagatgagttagatcgt
atgcttcacgaggcgatgaaacaacgtctcttatttgaacgccaaaaactaataatgatg
caacaacgttttcatctaaaacatttttatcaatatatcgttacacaacaagaaaaaaac
tcgaatttaaaaaagcaactttcaaaacgtatgtatgccatattaaaacaaaaagaacaa
cacttaattcaaaaggttgaaattttgaataacctcagtccaacacagacaatgttacgc
ggctattctattgtaaaaagagaaaatgaggttattacgagtcgcaagcaattatcgaaa
ggcgatgatattgagattatgatgaaagacggtagcatagacgcaataattgaaaaggta
aggtgccaaaatgacgtcaaaaaataa
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