Staphylococcus ratti: LN051_06885
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Entry
LN051_06885 CDS
T08246
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
srai
Staphylococcus ratti
Pathway
srai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN051_06885 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srai03019
]
LN051_06885 (pnp)
03016 Transfer RNA biogenesis [BR:
srai03016
]
LN051_06885 (pnp)
Enzymes [BR:
srai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LN051_06885 (pnp)
Messenger RNA biogenesis [BR:
srai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LN051_06885 (pnp)
Transfer RNA biogenesis [BR:
srai03016
]
Prokaryotic type
tRNA degradation factors
LN051_06885 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
SPATA25
Importin_rep_6
S1_RRP5
DUF3016
Motif
Other DBs
NCBI-ProteinID:
UEX89305
LinkDB
All DBs
Position
complement(1430102..1432204)
Genome browser
AA seq
700 aa
AA seq
DB search
MSQEKMVFKTEWANQPLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDGDFFPLT
VNYEEKMYAAGKIPGGFKKREGRPADEATLTARLIDRPIRPLFPEGYRHDVQIMNMVLSA
DPNCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGEYVINPNLEQKAQSRLDLEVA
GHKDAINMVEAGASEITETEMLEAILFGHKEIQRLCAFQEEIIAHIQPEKHEFIPQEKNQ
TLIDSVKAKAEENRLNEAIQTVDKQEREANLDAIKDAIVAEYINEEDPENEALLQEVNKI
INVLIKDEVRRLIADEKVRPDGRKPDEIRPLSSEVGLLPRAHGSGLFTRGQTQAISVLTL
GSISEYQIIDGLGEEEHKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALKYIIP
DEKTFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDESYT
ILTDIQGMEDALGDMDFKVAGTKDGITAIQMDIKIDGLTKEVIEEALEQARQGRLAILEH
MLQTIEQPRSELSAYAPKVETLMIKPEKIRDVIGPGGKQINEIIDATGVKLDIEQDGTVY
IGSTEQEMINQAREWIESIVREAEVGQVYEGKVKRIEKFGAFVELFPGKDALVHISQIAN
ERINKVEDVLKIGDTLQVKVTEIDKQGRVNASHKVLLNSK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaaaatggtatttaaaacggagtgggcaaaccaaccgttaacgatagaa
acaggtcaactcgctaaacaagcgaacggggcagtccttgttcgttatggtgatactgtt
gttttatcgacagcaacagcatccaaagaaccacgcgatggcgatttctttccattaact
gtaaattatgaagaaaaaatgtatgccgcaggtaaaattccaggtggatttaaaaagcgt
gaaggtcgtccagcagatgaagccacattaacagcccgtttaatcgatcgcccaattcgt
ccacttttcccagaagggtaccgtcatgatgttcaaattatgaacatggtgttaagtgca
gatccaaactgctccccagaaatggcagcaatgataggttcgtctatggcattaagtgtg
tcagatattcctttccaaggaccaattgcaggtgtaaatgtaggctatatcgatggcgaa
tatgtcattaatccaaatttagaacaaaaagcacagtcgcgtttagacttagaagtagcg
gggcacaaagacgcgattaacatggttgaagcaggtgcgagtgagattacagaaactgaa
atgttagaagcaattctatttggacataaagaaatccaaagattatgcgctttccaagaa
gaaattattgcacatattcaaccagaaaagcacgaatttattccacaagaaaaaaatcaa
acattaatcgattcagttaaagcgaaagctgaagaaaatcgattaaacgaagcgattcaa
acggtcgataaacaagaacgtgaagctaatctagatgcaattaaagacgcaattgttgct
gaatatattaatgaagaagaccctgagaacgaggcattgcttcaagaagtaaacaagatt
atcaacgtgttaatcaaagatgaggtacgtcgcttaattgctgatgaaaaggttagacca
gatggccgtaagccagatgaaattcgtccattatcttctgaagttggacttttaccacgt
gcgcatggttcaggtttatttacacgtggtcaaacacaagcaatatctgttttaacattg
ggttcgatttcagaatatcaaattattgatggcttaggagaagaagaacataaacgcttt
atgcatcactacaatttcccgaatttctctgttggtgagacaggacctgttcgtgcaccg
ggacgtcgtgaaattggacacggtgcgctaggtgaacgagcattaaaatatattattcct
gatgaaaaaacttttccatatacagtacgtattgtgagtgaagtgctagaatctaatggt
tcatcttcccaagcttctatctgtggctctacgcttgcattaatggatgcaggggtacca
attaaagcgccagtggctggtattgcgatgggactcgtaacgcgcgatgaaagttatacg
attttaacggatatccaagggatggaagatgcgcttggtgatatggactttaaagtagca
ggtacaaaagacggcattacagcgattcaaatggacattaaaattgatggcttaacaaaa
gaagtcattgaagaagcgcttgaacaagcacgtcaaggtcgtttagcgattttagaacat
atgcttcaaacaattgaacagcctcgttcagaattaagtgcgtatgcgcctaaagttgaa
actttaatgataaaacctgaaaaaatcagagatgttattggaccaggtggtaagcaaatt
aacgaaattattgatgcgactggcgtaaaattagacatcgaacaagatggtacggtttat
attggttcaacggaacaagagatgattaatcaagcacgtgaatggattgaaagcattgtg
cgcgaagcagaagtaggacaagtgtacgaaggaaaagtaaaacgtatcgaaaaatttggc
gcatttgtagagcttttccctggtaaagatgcattagttcacatttcacaaattgcgaac
gaacgtatcaataaagtggaagacgtacttaaaatcggcgatacgctacaagttaaggtc
actgagattgataaacaagggcgtgttaatgcgtctcataaagtattattaaactcaaaa
taa
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