KEGG   Staphylococcus ratti: LN051_07715
Entry
LN051_07715       CDS       T08246                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
srai  Staphylococcus ratti
Pathway
srai00010  Glycolysis / Gluconeogenesis
srai00020  Citrate cycle (TCA cycle)
srai00260  Glycine, serine and threonine metabolism
srai00280  Valine, leucine and isoleucine degradation
srai00310  Lysine degradation
srai00380  Tryptophan metabolism
srai00620  Pyruvate metabolism
srai00630  Glyoxylate and dicarboxylate metabolism
srai00640  Propanoate metabolism
srai00670  One carbon pool by folate
srai00785  Lipoic acid metabolism
srai01100  Metabolic pathways
srai01110  Biosynthesis of secondary metabolites
srai01120  Microbial metabolism in diverse environments
srai01200  Carbon metabolism
srai01210  2-Oxocarboxylic acid metabolism
srai01240  Biosynthesis of cofactors
Module
srai_M00009  Citrate cycle (TCA cycle, Krebs cycle)
srai_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srai_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
srai_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:srai00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LN051_07715 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LN051_07715 (lpdA)
   00620 Pyruvate metabolism
    LN051_07715 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LN051_07715 (lpdA)
   00640 Propanoate metabolism
    LN051_07715 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LN051_07715 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LN051_07715 (lpdA)
   00310 Lysine degradation
    LN051_07715 (lpdA)
   00380 Tryptophan metabolism
    LN051_07715 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LN051_07715 (lpdA)
   00670 One carbon pool by folate
    LN051_07715 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:srai04147]
    LN051_07715 (lpdA)
Enzymes [BR:srai01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LN051_07715 (lpdA)
Exosome [BR:srai04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LN051_07715 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA Pyr_redox_3 HI0933_like NAD_binding_8 FAD_oxidored FAD_binding_2 FAD_binding_3 AlaDh_PNT_C UDPG_MGDP_dh_N 3HCDH_N Lys_Orn_oxgnase DAO Thi4
Other DBs
NCBI-ProteinID: UEX89462
LinkDB
Position
complement(1606494..1607900)
AA seq 468 aa
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLN
VSHRFEQAQHGADLGVTAENVSLDFGKVQEFKGSVVNKLTSGVEGLLKGNKVEIVKGEAY
FVDKNSLRVMDDKSAQTYNFKNAIVATGSRPIEIPNFKFGGRVLDSTGALNLKEVPKKLV
VVGGGYIGSELGTAYANFGTEVTILEGAKDILGGFEKQMVQPVKKGMKAKGMTIETEALA
KSAEETDNGVKVTYEVKGEEKTIEADYVLVTVGRRPNTDELGLEEVGVKLTDRGLIDVDK
QSRTSVDSIYAIGDIVPGLPLAHKASYEAKIAAEAIAGHNSEVDYIGMPAVCFTEPELAQ
VGYTEAQAKEEGIEYKASKFPYQANGRALSLDDTTGFVKLITLKEDDTLIGAQVVGTSAS
DVIAELGLAIEAGMNAEDIALTVHAHPTLGEMSMEAAEKAIGLPIHTM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggtagtcggagattttccaattgaaacagatactattgtcatcggtgcaggaccagga
ggatacgttgcagcaattcgtgcagcacaacttggtcaaaaagtaacaattgttgagaaa
ggtaatttaggcggcgtttgtttaaacgttggttgtattccttcaaaagcattgttaaat
gtttcacaccgctttgaacaagcacaacatggggcagatttaggtgttactgctgaaaac
gtatctttagatttcggtaaagttcaagaattcaaaggttcagttgttaacaaattaaca
agtggcgttgaaggtttattgaaaggtaacaaagtagaaatcgttaaaggtgaagcttat
tttgttgataaaaatagcttacgtgtgatggacgataagagtgctcaaacatacaacttt
aaaaatgcaattgttgcgacaggatctcgtccgatcgaaatccctaacttcaaatttggg
ggccgtgtcttagattctacaggcgcgttaaaccttaaagaagtaccgaaaaaattagtt
gtcgtaggtggcggttacatcggttctgaattaggtacagcatacgctaacttcggaact
gaagtgacgattcttgaaggcgcaaaagatatcttaggcggtttcgagaaacaaatggtt
caacctgttaaaaaaggtatgaaagcaaaaggtatgacaattgaaacagaagctttagca
aaatcagctgaagaaacagataacggtgttaaagtgacttacgaagttaaaggcgaagaa
aaaacaatcgaagcagactacgtattagttacggttggtcgtcgtccaaacacagatgaa
ctaggtcttgaagaagtaggcgttaaactaacagatcgtggtttaatcgatgttgataaa
caaagccgtacttcagtagacagtatctatgcaattggtgatatcgttccgggattaccg
cttgcccacaaagcaagctacgaagcgaaaatcgctgctgaagctattgcaggacacaac
tcagaagtagattatatcggtatgccagctgtatgtttcactgagcctgaacttgctcaa
gttggttacactgaagcacaagctaaagaagaaggtatcgaatacaaagcttctaaattc
ccttatcaagcaaacggtcgtgcattatcattagatgatacgacaggtttcgttaagtta
attacacttaaagaagatgacacgttaattggtgctcaagttgtaggtacaagtgcctct
gacgtcattgctgaattaggacttgcgattgaagcaggtatgaatgctgaagacatcgca
ttaactgttcatgcacatccaactttaggtgaaatgagcatggaagctgctgaaaaagca
atcggcttaccaatccatacaatgtaa

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