Staphylococcus ratti: LN051_09405
Help
Entry
LN051_09405 CDS
T08246
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
srai
Staphylococcus ratti
Pathway
srai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN051_09405 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srai03019
]
LN051_09405 (recQ)
03400 DNA repair and recombination proteins [BR:
srai03400
]
LN051_09405 (recQ)
Enzymes [BR:
srai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LN051_09405 (recQ)
Messenger RNA biogenesis [BR:
srai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LN051_09405 (recQ)
DNA repair and recombination proteins [BR:
srai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LN051_09405 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
RloB
Motif
Other DBs
NCBI-ProteinID:
UEX89771
LinkDB
All DBs
Position
complement(1935930..1937708)
Genome browser
AA seq
592 aa
AA seq
DB search
MEQTLSHYFGYTRFRPGQKEIITNVLNQHHTLGVLPTGGGKSICYQVPGLMLGGTTLVIS
PLISLMKDQVDQLQTMGISAAYLNSSLTMKAQKEIETQLVNGELQFIYVAPERLENEMFL
RLLRHVNLKLVAFDEAHCISKWGHDFRPSYQAVIHRVLAMPQQFAIVALTATATTEVQQD
IMTSLGIHVSHLIKTSIKRSNLIFKVNNTYQRQKFVLNYVKEHQNVSGIIYCSTRKQVEA
VYEALEDANIPATYYHAGLSAKQRDEAQHEFLYDRKRIVVATNAFGMGIDKSNVRYVIHY
NMPGDLESYYQEAGRAGRDGLNSECILLFSDRDITLHQYFISSSTADDDYKEKMGEKLTK
MIQYTKTNKCLEATLVHYFEPNEKLAECQKCSNCEAQNKTYDMTKEAKMIISCVIRLGQK
EGYQTVIQVLRGEESDYLKHQNYEGLSTYGIMKSYTTGELHHLIDELRFKGYLNEYDEIL
MCDRSVEQLLNEDVQILTTPFKTKSKERVNINTVEGVDRHLFNALSEVRQKMSDQLDVPP
INIFSDYTLEEFAKRKPTTKQEMIQIEGVGSYKLKHYCPQFLEAIQNYKTHV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaacactgtcacattattttggatatacgcgttttcgtccaggacaaaaagaa
attattacaaatgtacttaatcagcatcatacattaggtgtgttacctacgggtggcggg
aaatccatttgttatcaagtccccggtttgatgctcgggggtacgacacttgtgattagc
ccactcatttctttgatgaaagatcaagtcgatcaattacaaacgatgggaatttctgca
gcgtatttaaatagtagtttgacgatgaaggcgcaaaaagaaattgaaacgcaactggtg
aatggagaactgcaatttatctatgttgcacctgagcgtcttgagaatgaaatgttttta
cgtttattgcgtcatgtgaaccttaaacttgtcgcctttgatgaagcacattgtatttca
aaatgggggcatgattttagaccgagctatcaagcagtaattcatcgtgttttagctatg
ccgcagcaatttgccatcgttgctttaacagcgacagctactactgaggttcaacaggat
attatgacgagtttaggtattcatgtctcacatctcattaaaacgagtattaaacgatca
aatttaatttttaaagtgaataacacatatcaacgtcaaaaatttgtattaaattatgtt
aaagaacaccaaaatgtttcaggtattatttattgttcgacacgtaaacaagtagaagcg
gtgtatgaagctttagaagacgcaaatataccagcgacttactatcatgcaggtttatct
gccaagcaacgcgatgaggcacaacatgagtttttatatgatcgtaaacgtattgttgta
gcaaccaatgcgtttgggatgggaattgataaatctaatgtgcgttatgtgattcattac
aatatgccaggagacttggagtcttattatcaagaagcagggagagctgggcgtgatgga
ctaaacagtgaatgtattttactgtttagtgatcgtgatattacgctacatcaatatttt
atatccagttctacggcagatgacgattacaaagaaaaaatgggtgaaaagctcactaaa
atgattcaatatacaaagacaaataaatgcctagaagcaacattagtccattactttgaa
cctaatgaaaaattggcagaatgtcagaaatgtagtaattgtgaagcgcaaaacaaaacg
tatgatatgacgaaagaagctaaaatgattattagttgtgtgatacgtctaggtcaaaaa
gaaggctatcaaaccgtcattcaagtgttaagaggagaagagtccgactacttaaaacac
caaaattatgaagggttgtcgacttatggcattatgaagtcctatactacaggtgaatta
catcacttaattgacgagttgcgttttaaaggatatttaaacgaatatgatgaaattttg
atgtgtgatcgttcagttgaacagttgttaaatgaagatgttcaaatattaacgacacca
ttcaagacgaaatctaaagaaagagtaaatattaatacggtagaaggcgtcgaccgtcat
ttatttaatgcattgagcgaagtgcgtcaaaaaatgagtgaccaacttgatgtcccgcca
atcaatattttctcagattatacgttagaagagtttgcgaaacgaaagcctacgactaaa
caagaaatgattcaaattgaaggagtaggaagctacaaactcaagcactattgtcctcaa
tttttagaggcgattcaaaattataaaacacatgtgtaa
DBGET
integrated database retrieval system
