Streptococcus ratti: FY406_01350
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Entry
FY406_01350 CDS
T06620
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
srat
Streptococcus ratti
Brite
KEGG Orthology (KO) [BR:
srat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srat03019
]
FY406_01350
Messenger RNA biogenesis [BR:
srat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FY406_01350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Imm8
Motif
Other DBs
NCBI-ProteinID:
QEY06415
LinkDB
All DBs
Position
complement(291437..292381)
Genome browser
AA seq
314 aa
AA seq
DB search
MKISQMKKDELFEGFYLIKSAELRKTRAGKDYLAFTFQDDSGEISGNLWDAQPYNVEEFT
AGKVVFMKGRREVYNGTPQVNQISLRHPKEGEPNDPKDFKEKPPVDVKEIRDYLEQMLFK
IENATWQRIVRALYRKYSHEFFTYPAAKTNHHAFEVGLAYHTATMVRLADSIGDIYQELD
KSLLFAGIMLHDLAKVLELTGPDNTEYTVRGNLIGHIALIDEEITKVLAELNIDDSKEDV
IVLRHVILSHHGLLEYGSPVRPRIMEAEVIHMIDNLDAEMMMMTSALSRVSEGEMTGRIF
AMDNRSFYKPKTNH
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattagtcaaatgaaaaaagatgagctttttgaaggattttatctcattaagtca
gcagaacttcgaaaaacaagagctggcaaggattatcttgctttcacttttcaggatgac
agcggagaaatctccggcaatctttgggatgctcagccctataatgtcgaagaattcaca
gctggcaaagttgtctttatgaagggccgccgtgaggtctacaacggtaccccgcaggtc
aatcaaatcagcttgcgccatcccaaggagggtgaacctaatgatcctaaggatttcaag
gaaaaaccgccggttgatgtcaaggaaatcagagactatttggagcagatgctctttaaa
attgaaaatgctacttggcagcggattgtcagagcgctttaccgtaagtacagccatgaa
tttttcacttatcctgccgccaagaccaatcaccatgcttttgaagtcggtctggcctat
catacagcaaccatggttcgcttggcagacagtatcggagatatttatcaagagcttgat
aagagccttctttttgcaggaattatgctccatgatttagccaaggttcttgagttgact
ggtcctgataatacagagtatactgtccgcggtaatcttattggccatattgccttgatt
gatgaagaaattaccaaggttttagccgagctaaacattgatgatagcaaggaggatgtc
atcgtccttcgccatgttatcctcagccatcacgggctcttagaatacggcagtccggtc
agaccaaggattatggaagcagaggttattcatatgattgacaaccttgatgcggaaatg
atgatgatgacttcagccctgtcgcgggtgtccgaaggagaaatgacaggccggattttt
gctatggacaatcgttctttctataagcccaaaacaaatcactaa
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