Streptococcus ratti: FY406_03555
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Entry
FY406_03555 CDS
T06620
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
srat
Streptococcus ratti
Pathway
srat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FY406_03555 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srat03019
]
FY406_03555 (pnp)
03016 Transfer RNA biogenesis [BR:
srat03016
]
FY406_03555 (pnp)
Enzymes [BR:
srat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FY406_03555 (pnp)
Messenger RNA biogenesis [BR:
srat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FY406_03555 (pnp)
Transfer RNA biogenesis [BR:
srat03016
]
Prokaryotic type
tRNA degradation factors
FY406_03555 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
KH_2
PCB_OB
SPATA25
Motif
Other DBs
NCBI-ProteinID:
QEY06789
LinkDB
All DBs
Position
717902..720094
Genome browser
AA seq
730 aa
AA seq
DB search
MSKQVFETVFAGKKLVVEIGQVAKQANGAAVIRYGNSTVLTAAVMSKKMSTGDFFPLQVN
YEEKMYAAGKFPGGFNKREGRPSTDATLTARLIDRPIRPMFAEGFRNEIQVINTVLSYDE
DASAPMAAMFGSSLALSISDIPFNGPIAGVQVAYIDGQFIINPSAAQKEASLLELTVAGT
KDAINMVESGAKELPEEIMLEALLKGHEAVRELIAFQEEIVAAVGKEKAEVELLQVDPEL
QAEIITAYNADLQKAVQVEEKKAREAATEAVKEQVIAVYEERYADDENYETIMRDVAEIL
EQMEHAEVRRLITEDKIRPDGRRVDEIRPLDAEIDFLPQVHGSGLFTRGQTQALSVLTLA
PMGETQIVDGLDPEHKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIAGITPQILQEALAQAKKARFEILDLI
EATISEPRSELAPTAPKIDTIKIDVDKIKIIIGKGGETIDKIIEETGVKIDIDDEGNVAI
YSSDQDAINRAKEIIKNLVREAKVGEVYEAKVVRIEKFGAFVNLFDQTDALVHISEISWS
RINKVEDVLAIGDTITVKVIKIDDKGRVDASMKALLPRPPKAEKTSSHHKSEKHHRPEKK
HKDKEEKHDA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaagtgtttgaaacagtctttgctggtaaaaagttagtggttgaaatcggt
caggttgctaaacaagccaatggagctgctgttattcgctatggaaattcaactgtcctt
acagctgctgttatgtctaagaaaatgtcaacaggtgactttttcccgctgcaagtcaac
tatgaagaaaaaatgtatgctgccggaaaattcccaggtggcttcaacaagcgcgaagga
cgcccgtcaacagatgcaaccttaacagcccgccttattgatcgccccatccgtccgatg
tttgcggaaggcttccgcaatgaaattcaggttatcaatactgtcctttcctatgatgaa
gatgccagcgctccaatggcagccatgtttggcagttcgcttgctctttcaatttctgat
attccctttaatgggcccattgccggagtgcaggtggcttacattgatggtcagtttatc
atcaatccatcagctgcgcaaaaagaagcgtcacttcttgaattaactgttgctggtacc
aaagatgccatcaacatggtggaatccggcgccaaagaattgccagaagaaattatgctt
gaagcgcttcttaagggacatgaggctgtccgtgagctgatcgctttccaagaagaaatc
gtagcagcagttggcaaagaaaaagctgaggttgagttgcttcaggttgatccagaattg
caagctgaaattatcacagcttacaatgctgatcttcaaaaagcggttcaagttgaagag
aaaaaagcgcgtgaagcagcgactgaagctgttaaagagcaagtcattgctgtttacgaa
gaacgctacgctgatgatgaaaattacgaaacaattatgcgtgacgttgctgaaatcctt
gaacaaatggaacacgcagaagtacgtcgcttgattaccgaagataagattcgtcctgac
ggccgtcgtgttgatgaaatccgtccattggatgcggaaattgattttctgccgcaggtg
catggttctggtcttttcacacgcggccagactcaggctttatcagtgttgaccttagct
ccgatgggggaaacacaaattgttgacggtcttgatccagagcataagaagcgctttatg
caccactacaattttccacagtattctgtcggtgaaacgggccgctacggcgcaccgggc
cgccgtgaaatcggtcacggagctctgggcgagcgtgctcttgcgcaagttcttcctagc
ttagaagaatttccatatgctattcgtctggtagcagaagttttggaatcaaatggttca
tcttcgcaggcttctatctgtgcggggactcttgccctcatggctggcggtgtgcctatt
aaggcaccggttgccggaattgctatggggctcatttcagacggtaccaattatactgtg
ttgacagatattcaagggcttgaagatcactttggggacatggactttaaggttgccgga
acccgcgaaggaattacagctctgcagatggacattaagattgctggaatcacaccgcag
attctgcaggaagctcttgctcaggcgaaaaaagctcgctttgaaattcttgatttaatt
gaggcgactatttctgagccccgttcggaattggctccgactgcgccaaaaattgatacc
attaagattgatgttgataagatcaagattatcattggtaaaggcggtgagaccattgat
aaaatcattgaagaaaccggtgttaaaattgacatcgatgacgaaggcaatgttgccatt
tactccagcgatcaagatgctatcaaccgtgctaaggaaattatcaagaacttggtgcgt
gaagcaaaggtcggtgaggtttatgaggctaaggttgtccgcattgaaaaatttggagcc
tttgtcaacctgtttgaccagacagatgctttggttcatatttctgagatttcctggagc
cgaatcaataaagtcgaagatgtactggcaataggggatacgattaccgttaaggttatc
aaaatagatgacaagggacgtgttgatgcttctatgaaggctcttcttccgcggccgccg
aaagcggaaaaaacttccagccatcataaatctgaaaaacatcatcgtcctgaaaaaaag
cataaggataaagaagaaaaacatgatgcataa
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