Streptococcus ratti: FY406_04270
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Entry
FY406_04270 CDS
T06620
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
srat
Streptococcus ratti
Pathway
srat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FY406_04270 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srat03019
]
FY406_04270 (groL)
03110 Chaperones and folding catalysts [BR:
srat03110
]
FY406_04270 (groL)
03029 Mitochondrial biogenesis [BR:
srat03029
]
FY406_04270 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srat04147
]
FY406_04270 (groL)
Enzymes [BR:
srat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FY406_04270 (groL)
Messenger RNA biogenesis [BR:
srat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FY406_04270 (groL)
Chaperones and folding catalysts [BR:
srat03110
]
Heat shock proteins
HSP60 / Chaperonin
FY406_04270 (groL)
Mitochondrial biogenesis [BR:
srat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FY406_04270 (groL)
Exosome [BR:
srat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FY406_04270 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FY406_04270 (groL)
Exosomal proteins of breast cancer cells
FY406_04270 (groL)
Exosomal proteins of colorectal cancer cells
FY406_04270 (groL)
Exosomal proteins of bladder cancer cells
FY406_04270 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4142
Motif
Other DBs
NCBI-ProteinID:
QEY06913
LinkDB
All DBs
Position
869099..870724
Genome browser
AA seq
541 aa
AA seq
DB search
MAKDIKFSADARSAMVRGVDTLADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE
TAVATAVDGLKAIAQPVSGKEAIAQVAAVSSRSEKVGEYISEAMEKVGNDGVITIEESRG
METELDVVEGMQFDRGYLSQYMVTDNEKMVADLENPYILITDKKISNIQDILPLLEEVLK
TNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVIT
EDLGLELKNATMDALGQAARVTIDKDTTVIVEGSGSKEAIENRVALIKSQIETTTSDFDR
EKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALINV
IEKVAALDLEDDAATGRNIVLRALEEPVRQIAKNAGYEGSVVIDKLKNSPVGTGFNAANG
EWVDMIKEGIIDPVKVTRSALQNAASVASLILTTEAVVADHPAPEAPAAPAMDPSMMGGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattttcagcagatgcccgttccgctatggtacgcggcgtagat
actttggcagataccgttaaggtgactttaggccctaaaggacgcaatgtggttcttgaa
aagtcattcggctctcctttgattactaacgatggggtaaccattgctaaggaaatcgaa
ttggaagatcattttgaaaatatgggagccaagctggtttcagaggttgcttcaaaaacc
aatgatattgcaggtgacggtacgacaacagcgactgttttgactcaggcgattgttcgc
gaaggtcttaaaaatgtaacagctggtgccaatccaatcggcatccgccgcggaattgaa
actgccgttgcgacagctgtggacggtttgaaagctattgctcagcctgtttctggtaag
gaagctattgcgcaggttgctgctgtatcttcacgttctgaaaaggtcggggaatacatt
tctgaagctatggaaaaagttggcaatgacggtgttatcacgattgaagaatcacgcggc
atggaaactgagcttgacgttgttgaaggaatgcagtttgaccgcggctacctgtctcaa
tacatggtaacagataatgaaaaaatggttgccgatctggaaaatccttatattttaatt
accgataagaaaatttcaaacattcaagatattcttcctttgctggaagaagttcttaaa
actaatcgtccgcttttgattattgctgatgatgtggatggtgaagctcttccaacctta
gttttaaataaaatccgcggtaccttcaatgttgtggctgttaaggctcccggctttggt
gaccgccgtaaggctatgttagaagatattgctatcttaactggcggaactgtcattaca
gaagaccttggtctcgaacttaaaaatgcgacaatggatgctctaggccaagcggcccgc
gtcacaattgataaggatacaactgtcattgttgaaggttcaggcagcaaggaagctatt
gaaaaccgcgttgcacttatcaaatcgcaaattgaaacaacaacttcagactttgaccgt
gaaaaactgcaagaacgtttagctaaattatcaggcggtgttgctgtcattaaagtcgga
gcagctactgaaacagagttaaaagaaatgaaacttcgtattgaagatgcgcttaatgcg
acacgtgctgctgttgaagaaggtattgtatcaggaggcggtaccgctcttatcaatgta
attgaaaaggttgctgcccttgacttggaagatgatgctgcaacaggccgcaatattgtt
ctgcgtgccttggaagaacctgttcgccaaattgctaagaatgctggctatgaaggttcg
gtcgttattgacaaattgaagaacagccctgtaggaacaggcttcaatgctgccaatggt
gagtgggttgatatgattaaagaaggcatcattgaccctgtgaaggtgacccgttcagct
ctgcaaaatgcggcttctgtagcaagccttattctgacaacagaagcagttgtagctgat
catccagcaccagaagctcctgcagctccagccatggatccaagcatgatgggcggcatg
atgtaa
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