Streptococcus ratti: FY406_05520
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Entry
FY406_05520 CDS
T06620
Name
(GenBank) penicillin-binding protein
KO
K12556
penicillin-binding protein 2X
Organism
srat
Streptococcus ratti
Pathway
srat00550
Peptidoglycan biosynthesis
srat01100
Metabolic pathways
srat01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FY406_05520
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FY406_05520
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srat01011
]
FY406_05520
Peptidoglycan biosynthesis and degradation proteins [BR:
srat01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FY406_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
MoCoBD_2
Motif
Other DBs
NCBI-ProteinID:
QEY07139
LinkDB
All DBs
Position
1110484..1112733
Genome browser
AA seq
749 aa
AA seq
DB search
MNNFKKRFLDYVIGDRRTPEKNRERVGQNLMILSVFVFFVFIINFIIIIGTDRKFGVNLS
KGASSVYQTVQKVQAKRGTIYDRNGNPIAEDSTTYNVYAVIDKSYVSTSGEKLYVQPSQY
NKVADILHQHLGMDKKYVISQLGQKKLTQVSFGTKGSDITYSTMTAVTKAFKDAKIKGVA
FTTSPGRMYPNGTFASQFIGLAQVKENKDGSKSLVGATGMEAALDKLLSGKDGQLTYEKD
KNGNTLLGAATTVKKAVDGKDVYTTLSAPIQTYLETQMDTFQSKAQGVQASATLVNAKTG
EILATSQRPSFNSDTKEGLDAKGFTWQNTLYQTNYEPGSTMKVMLLAAAIDEGVFNPNET
YNNASLSLADATIKDWSVNEGISQGGYMTFAQGFAYSSNVGMTLLEQKMGNDKWLSYLSK
YRFGLPTRFGMGSEASGLLPSDNAVTIAMSAFGQGIGVTQTQMLRAFSSVSNDGVMLEPQ
FITKIYDPKTGTSRTAKKEVVGNPVSADAAKQTRQYMVTVGTDPSYGTLYSASLGGPVIK
VGNQSVAVKSGTAQIASEDGSGYLTGSTDYIYSVVAMVPSDNPDFIMYVTLQQPKTFSFT
FWQDVVNPVLEEATLMKDTLLSPVETPEDQQTKYRLPDVIGKSPGNTADELRQNLVHPIV
LGTGNKITKTSVAAGSNLKENQQVLMLTSHFETMPDMYGWTKKNVKKFEDWTGINVVFKG
KKSGKVIKQSISTGSKLKNLKKIKITLGD
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactttaaaaagcgatttttagactatgtcataggtgatcgcaggacacctgaa
aaaaaccgcgaacgtgttggacaaaatttaatgattttgtctgtctttgtcttttttgtt
ttcattatcaattttattatcattatcggaacagacagaaagttcggtgttaacttatca
aagggagcttcatctgtttatcagacagtgcaaaaggttcaggccaagcgcggaacaatt
tatgaccgcaatggcaatcccattgccgaggactcaacaacctacaatgtctatgctgtt
attgataaatcttatgtgtcaacttccggagagaaactttatgtacagccttctcagtat
aataaggtcgctgatattctccatcagcatctaggcatggataaaaaatatgtaatttct
cagctggggcaaaagaagttaactcaggtctcttttggaaccaaaggatcagatattacc
tacagtacgatgacagctgttactaaggcgtttaaggatgctaaaattaagggagttgct
ttcactacaagtcccggccgcatgtatccaaatggtacttttgcatcacaattcatcggt
ctggcacaggttaaagaaaataaggacggcagcaagagtctagttggtgcgacaggcatg
gaagctgctttggataaacttttgtccgggaaagacggacaactaacctacgaaaaagat
aaaaacggtaacaccttgctgggggctgcgacaacggttaagaaagctgtggatggaaaa
gatgtctatacgactttatctgctccaatccagacctatttagaaacgcagatggatacc
ttccaaagcaaggcccaaggtgttcaggcaagtgccactcttgttaatgctaaaacagga
gagattttggcaacatcacagcggccaagctttaattcagatactaaagaagggttggat
gccaaggggttcacctggcaaaatactctctaccagaccaactatgagcccggttcaaca
atgaaggttatgctgcttgctgcagcaattgatgaaggtgttttcaacccgaacgaaacc
tataataatgccagtctctccttggctgatgcaactattaaggactggtctgtcaatgaa
ggtatctctcaaggaggctatatgacttttgcccaaggttttgcctattcaagtaatgtc
ggcatgaccttgctggagcaaaagatgggcaatgacaagtggcttagctacctcagcaaa
taccgttttggtctgccgactcgttttggcatgggcagcgaggcctcaggactgctgccg
tcggacaatgcggttacgattgccatgagtgcttttggacaagggattggagtaacccag
acacaaatgctcagagctttttcatctgtgtcaaatgatggtgttatgctcgaaccccaa
ttcatcacaaaaatttatgatcccaaaacaggaaccagccgtacagctaaaaaagaggta
gtcggtaatcctgtgtcggcagatgcagccaagcaaacacggcagtatatggtaactgtc
ggaacagacccttcttatggaaccctctattcagccagtctgggcggacctgtcatcaag
gtaggcaatcagtctgttgccgttaaatcagggactgcccagattgcttctgaagacggg
tcaggttatctgaccggcagcactgactatatctattcggttgtagctatggtaccgtct
gataatcctgactttattatgtatgtaaccctgcagcagccaaaaacatttagttttacc
ttttggcaggatgtcgtcaatcctgttttggaagaagcaactttgatgaaagataccttg
ctgtcgccggttgaaacaccagaagatcagcagaccaagtaccgtttgccggatgttatc
ggaaaaagtccgggcaacacagcggatgaacttcggcagaatcttgttcatcctattgtg
cttggaacaggcaataaaatcacaaaaacgtctgtagctgccggttcaaacttaaaagaa
aaccagcaggtgctaatgctgaccagtcactttgaaaccatgcctgatatgtatggctgg
actaagaaaaatgtcaaaaaattcgaggactggaccggtatcaatgtggtttttaaaggg
aaaaagtccggaaaggtcatcaaacaaagcatcagtacaggcagcaaacttaaaaacttg
aaaaaaattaaaataactctaggagactaa
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